Influence of the Oxidatively Damaged Adduct 8-Oxodeoxyguanosine on the Conformation, Energetics, and Thermodynamic Stability of a DNA Duplex (original) (raw)

Thermodynamic Signature of DNA Damage: Characterization of DNA with a 5-Hydroxy-2′-deoxycytidine·2′-Deoxyguanosine Base Pair

Manjori Ganguly

Biochemistry, 2012

View PDFchevron_right

Solution Structure of Duplex DNA Containing the Mutagenic Lesion 1, N 2 -Etheno-2′-deoxyguanine † ‡

Carlos De los santos

Biochemistry, 2008

View PDFchevron_right

Spectroscopic and Calorimetric Characterizations of DNA Duplexes Containing 2-Aminopurine †

Ramon Eritja

Biochemistry, 1996

View PDFchevron_right

Structure and Stability of Duplex DNA Containing (5'S) 5',8-Cyclo-2'-Deoxyadenosine: An Oxidative Lesion Repair by NER

Mark Lukin

2012

View PDFchevron_right

Impact of α‐hydroxy‐propanodeoxyguanine adducts on DNA duplex energetics: Opposite base modulation and implications for mutagenicity and genotoxicity

Francis Johnson

Biopolymers, 2010

View PDFchevron_right

Molecular Dynamics Simulations of Mismatched DNA Duplexes Associated with the Major C8-Linked 2′-Deoxyguanosine Adduct of the Food Mutagen Ochratoxin A: Influence of Opposing Base, Adduct Ionization State, and Sequence on the Structure of Damaged DNA

Richard Manderville

Chemical Research in Toxicology, 2018

View PDFchevron_right

Structural and Thermodynamic Features of Spiroiminodihydantoin Damaged DNA Duplexes

lei jia

Biochemistry, 2005

View PDFchevron_right

Solution Structure of a DNA Duplex Containing the Exocyclic Lesion 3, N 4 -Etheno-2‘-deoxycytidine Opposite 2‘-Deoxyguanosine †

Arthur Grollman, Francis Johnson

Biochemistry, 1997

View PDFchevron_right

Long-range oxidative damage in duplex DNA: the effect of bulged G in a G-C tract and tandem G/A mispairs

Edna Boone

Nucleic Acids Research, 2002

View PDFchevron_right

Structure and Stability of Duplex DNA Containing (5′S)-5′,8-Cyclo-2′-deoxyadenosine: An Oxidatively Generated Lesion Repaired by NER

Mark Lukin

Chemical Research in Toxicology, 2012

View PDFchevron_right

Analysis of 7,8Dihydro8-oxo-2′-deoxyguanosine in Cellular DNA during Oxidative Stress

Dipti Mangal

Chemical Research in Toxicology, 2009

View PDFchevron_right

Solution structure of the 2-amino-1- methyl-6-phenylimidazo[4,5- b ]pyridine C8-deoxyguanosine adduct in duplex DNA

Monique Balhorn

Proceedings of the National Academy of Sciences, 2001

View PDFchevron_right

Reaction of Singlet Oxygen with 2'-Deoxyguanosine and DNA. Isolation and Characterization of the Main Oxidation Products

Jean Cadet

Chemical Research in Toxicology, 1995

View PDFchevron_right

Destabilization of DNA duplexes by oxidative damage at guanine: implications for lesion recognition and repair

Supat Jiranusornkul

Journal of The Royal Society Interface, 2008

View PDFchevron_right

Hidden in Plain Sight: Subtle Effects of the 8-Oxoguanine Lesion on the Structure, Dynamics, and Thermodynamics of a 15-Base Pair Oligodeoxynucleotide Duplex

Haribabu Arthanari, Benjamin Lane, Charisse Crenshaw

Biochemistry, 2011

View PDFchevron_right

Site-specifically located 8-amino-2'-deoxyguanosine: thermodynamic stability and mutagenic properties in Escherichia coli

Francis Johnson

Nucleic Acids Research, 2001

View PDFchevron_right

Differential destabilization of the DNA oligonucleotide double helix by a T · G-mismatch,3,N⁴-ethenocytosine, 3,N⁴-ethanocytosine or an 8-(hydroxymethyl)-3,N⁴-ethenocytosine adduct incorporated into the same sequence contexts

Alex Perry

Chemical Research in Toxicology, 2000

View PDFchevron_right

Structure and Stability of Duplex DNA Containing the 3-(Deoxyguanosin- N 2 -yl)-2-acetylaminofluorene (dG( N 2 )-AAF) Lesion: A Bulky Adduct that Persists in Cellular DNA

Carlos Abaete C de los Santos

Chemical Research in Toxicology, 2006

View PDFchevron_right

A study of 7-deaza-2'-deoxyguanosine 2'-deoxycytidine base pairing in DNA

Mahima Kaushik

Nucleic Acids Research, 2007

View PDFchevron_right

Effects of Duplex Stability on Charge-Transfer Efficiency within DNA

dimitar angelov, Jean Cadet

Topics in Current Chemistry, 2004

View PDFchevron_right

Solution Structure of an O 6 -[4-oxo-4-(3-Pyridyl)butyl]guanine Adduct in an 11mer DNA Duplex: Evidence for Formation of a Base Triplex †

Monique Balhorn

Biochemistry, 2003

View PDFchevron_right

The First Example of a Hoogsteen Basepaired DNA Duplex in Dynamic Equilibrium with a Watson-Crick Basepaired Duplex���A Structural (NMR), Kinetic and Thermodynamic Study

Peter Agback

2001

View PDFchevron_right

Impact of thymine glycol damage on DNA duplex energetics: Correlations with lesion-induced biochemical and structural consequences

Francis Johnson

Biopolymers, 2015

View PDFchevron_right

Characterization of DNA with an 8-oxoguanine modification

Manjori Ganguly, Luis A Marky

Nucleic Acids Research, 2011

View PDFchevron_right

The hydrogen-bonding structure in parallel-stranded duplex DNA is reverse Watson-Crick

Cees Otto

Biochemistry, 1991

View PDFchevron_right

Structural study of DNA duplexes containing the (6-4) photoproduct by fluorescence resonance energy transfer

Takashi Kodama

Nucleic Acids Research, 2001

View PDFchevron_right

NMR Characterization of a DNA Duplex Containing the Major Acrolein-derived Deoxyguanosine Adduct gamma -OH-1,-N2-Propano-2'-deoxyguanosine

Francis Johnson

Journal of Biological Chemistry, 2001

View PDFchevron_right

Structural and kinetic aspects of chemical reactions in DNA duplexes. Information on DNA local structure obtained from chemical ligation data

Vladimir Sergeev

Nucleic Acids Research, 1991

View PDFchevron_right

Effect of the 1-(2′-deoxy-β-D-ribofuranosyl)-3- nitropyrrole residue on the stability of DNA duplexes and triplexes

Jay George

1997

View PDFchevron_right