Phylogenetic Inference Using Molecular Data (original) (raw)
Related papers
Evolution, 1998
Statistical Methods in Phylogenetic and Evolutionary Inferences
Statistica, 2009
A biologist’s guide to Bayesian phylogenetic analysis
Nature Ecology & Evolution, 2017
Phylogenetic analyses: A toolbox expanding towards Bayesian methods
International Journal of Plant Genomics, 2008
On the maximum likelihood method in molecular phylogenetics
Journal of Molecular Evolution, 1991
Probability distribution of molecular evolutionary trees: A new method of phylogenetic inference
Journal of Molecular Evolution, 1996
ReviewArticle Phylogenetic Analyses: A Toolbox Expanding towards Bayesian Methods
Molecular phylogenetics: principles and practice
Nature Reviews Genetics, 2012
2006
Assessing the Uncertainty in Phylogenetic Inference
Statistics for Biology and Health, 2005
5 Quantitative Approaches to Phylogenetics
Handbook of Paleoanthropology, 2007
Bayesian Inference of Phylogeny and Its Impact on Evolutionary Biology
Science, 2001
An Integrative Approach for Phylogenetic Inference
2009
Parsimony, Likelihood, and the Role of Models in Molecular Phylogenetics
Molecular Biology and Evolution, 2000
MOLPHY: Programs for molecular phylogenetics based on maximum likelihood, vers. 2.3
1996
Molecular Phylogenetics: Mathematical Framework and Unsolved Problems
Structural Approaches to Sequence Evolution, 2007
Do model-based phylogenetic analyses perform better than parsimony? A test with empirical data
Cladistics, 2011
Application and accuracy of molecular phylogenies
Science, 1994
Bayesian phylogenetic inference using DNA sequences: a Markov Chain Monte Carlo Method
Molecular Biology and Evolution, 1997
A hierarchical model for incomplete alignments in phylogenetic inference
Bioinformatics, 2009
Journal of applied genetics, 2008
The impact of sequence parameter values on phylogenetic accuracy
Coalescent methods for estimating phylogenetic trees
Molecular Phylogenetics and Evolution, 2009
Journal of Applied Genetics, 2008
Experimental Tests of Phylogenetic Inference Methods
Systematic Biology, 1993
Systematic Biology, 2009
Molecular Biology and Evolution, 2001
Potential Applications and Pitfalls of Bayesian Inference of Phylogeny
Systematic Biology, 2002
Comparison of the Accuracies of Several Phylogenetic Methods Using Protein and DNA Sequences
Molecular Biology and Evolution, 2004
Empirical evaluation of a prior for Bayesian phylogenetic inference
Philosophical Transactions of the Royal Society B: Biological Sciences, 2008
Systematic Biology, 2010
Estimating Maximum Likelihood Phylogenies with PhyML
Methods in Molecular Biology, 2009
Cladistics, 2017
Multiple sequence alignment accuracy and phylogenetic inference
2006
The Importance of Proper Model Assumption in Bayesian Phylogenetics
Systematic Biology, 2004