Bioinformatics approaches to quadruplex sequence location (original) (raw)

Bioinformatics analyses and in vitro evidence for five and six stacked G-quadruplex forming sequences

Václav Brázda

Biochimie, 2018

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Mapping the sequences of potential guanine quadruplex motifs

Alan Todd

Nucleic Acids Research, 2011

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Quadruplex DNA: sequence, topology and structure

Alan Todd

Nucleic Acids Research, 2006

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Highly prevalent putative quadruplex sequence motifs in human DNA

Alan Todd

Nucleic Acids Research, 2005

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G-Quadruplexes Involving Both Strands of Genomic DNA Are Highly Abundant and Colocalize with Functional Sites in the Human Genome

Andrzej Kudlicki

PLOS ONE, 2016

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G-quadruplex structures: in vivo evidence and function

Hans-joachim Lipps

Trends in cell biology, 2009

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QGRS Mapper: a web-based server for predicting G-quadruplexes in nucleotide sequences

Paramjeet Bagga, O. Kikin

Nucleic Acids Research, 2006

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Structural Diversity and Specific Recognition of Four Stranded G-Quadruplex DNA

Sarika Saxena, Shrikant Kukreti

Current Molecular Medicine, 2011

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G-Quadruplexes: From Guanine Gels to Chemotherapeutics

Tracy Bryan

Molecular Biotechnology, 2011

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Meeting report: Second international meeting on quadruplex DNA

Anh Phan

Biochimie, 2009

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DNA and RNA quadruplex-binding proteins

Miroslav Fojta, Jack Liao

International journal of molecular sciences, 2014

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The evolving world of protein-G-quadruplex recognition: A medicinal chemist’s perspective

Claudia Sissi

Biochimie, 2011

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Journal of Biotechnology, Computational Biology and Bionanotechnology REVIEW PAPER How to study G-quadruplex structures

Anna Teubert

2016

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PPG peptide nucleic acids that promote DNA guanine quadruplexes

Igor Panyutin

Chembiochem : a European journal of chemical biology, 2014

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A reverse transcriptase stop assay revealed diverse quadruplex formations in UTRs in mRNA

Hiroaki YABUUCHI

Bioorganic & Medicinal Chemistry Letters, 2010

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Crystallographic studies of quadruplex nucleic acids

Nancy Campbell

Methods, 2007

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The disruptive positions in human G-quadruplex motifs are less polymorphic and more conserved than their neutral counterparts

Sigve Nakken

Nucleic Acids Research, 2009

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G-Quadruplex Nucleic Acids

Mateus Webba da Silva

Journal of Nucleic Acids, 2010

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GRSDB: a database of quadruplex forming G-rich sequences in alternatively processed mammalian pre-mRNA sequences

Paramjeet Bagga

Nucleic Acids Research, 2006

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Function and targeting of G-quadruplexes

Linda Payet

Current opinion in molecular therapeutics, 2009

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Quantitative analysis and prediction of G-quadruplex forming sequences in double-stranded DNA

Minji Kim

Nucleic acids research, 2016

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RNA G-quadruplex structures exist and function in vivo

Yiliang Ding

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The Amino Acid Composition of Quadruplex Binding Proteins Reveals a Shared Motif and Predicts New Potential Quadruplex Interactors

Nikol Mikysková, Martin Bartas, Václav Brázda

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Identification of G-quadruplex clusters by high-throughput sequencing of whole-genome amplified products with a G-quadruplex ligand

Kazunori Ikebukuro

Scientific reports, 2018

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Structural Polymorphism of Guanine Quadruplex-Containing Regions in Human Promoters

Anthony Mittermaier

International Journal of Molecular Sciences

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Identification and characterization of RNA guanine-quadruplex binding proteins

Zoltan Konthur

Nucleic Acids Research, 2014

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Quartets in G-major. The First International Meeting on Quadruplex DNA

Jean-louis Mergny

EMBO reports, 2007

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Quadfinder: server for identification and analysis of quadruplex-forming motifs in nucleotide sequences

suvasis maiti

2006

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