Selection for efficient translation initiation biases codon usage at second amino acid position in secretory proteins (original) (raw)
Sequence information required for bacterial protein export
Spencer Benson
BioEssays, 1985
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The role of the positively charged N-terminus of the signal sequence of E. coli outer membrane protein PhoE in export
Wilbert Bitter
Biochimica et Biophysica Acta (BBA) - Biomembranes, 1989
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Y. Zalucki
Biotechnology Journal, 2011
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Research Article jmb A New Signal Sequence for Recombinant Protein Secretion in
Rajeev Soni
2014
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Analysis of microsomal polypeptides involved in the co-translational translocation of secretory proteins
Brian Austen
Biochemical Society Transactions, 1984
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Anthony Scott-Tucker
FEMS Microbiology Letters, 2010
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Super Secondary Structure Consisting of a Polyproline II Helix and a β-Turn in Leucine Rich Repeats in Bacterial Type III Secretion System Effectors
Norio Matsushima
The protein journal, 2018
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Annick Jacq
The EMBO journal, 1990
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Hiwa Målen
Journal of Proteomics, 2011
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membrangeneThe secE encodes an integral protein required for protein export in Escherichia coli
Annick Jacq
2007
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Françoise Jacob-dubuisson
Trends in Microbiology, 2000
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mihai pop
Protein Expression and Purification, 2006
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Shahrokh Ghovvati
Current Proteomics
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RESEARCH LETTER: The unusual extended signal peptide region is not required for secretion and function of an Escherichia coli autotransporter: Extended signal peptide not required for Pet secretion
Karina Tveen Jensen
Fems Microbiology Letters, 2010
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Robert Chou
Journal of Biological Chemistry, 2005
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Protein export in prokaryotes and eukaryotes Theme with variations
Peter Klappa
FEBS Letters, 1991
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Escherichia coli trigger factor is a prolyl isomerase that associates with nascent polypeptide chains
Stefanie Hauser
Proceedings of the National Academy of Sciences, 1996
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Younes Ghasemi
Recent Patents on Biotechnology, 2019
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Andreas Plückthun
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The translation of recombinant proteins in E. coli can be improved by in silico generating and screening random libraries of a −70/+96 mRNA region with respect to the translation initiation codon
Eric Blanc
Nucleic Acids Research, 2007
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Efficient function of signal peptidase 1 of Escherichia coli is partly determined by residues in the mature N-terminus of exported proteins
Joanna Musik
Biochimica et Biophysica Acta (BBA) - Biomembranes
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Dual regulation of Escherichia coli secA translation by distinct upstream elements
Donald Oliver
Journal of Molecular Biology, 1997
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Olins, P.O. & Rangwala, S.H. A novel sequence element derived from bacteriophage T7 mRNA acts as an enhancer of translation of the lacZ gene in Escherichia coli. J. Biol. Chem. 264, 16973-16976
Peter Olins
Journal of Biological Chemistry
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Rocky Cranenburgh
Trends in Microbiology, 2008
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A 30-residue-long" export initiation domain" adjacent to the signal sequence is critical for protein translocation across the inner membrane of Escherichia coli
Gunnar von Heijne
1991
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Supplemental Material Desguin 2015 J. Bacteriol. 197:219
Eric Viaene
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Use of synthetic signal sequences to explore the protein export machinery
Lila Gierasch
Biopolymers, 2007
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The secE gene encodes an integral membrane protein required for protein export in Escherichia coli
Annick Jacq
Genes & Development, 1989
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A short N-proximal region of prochymosin inhibits the secretion of hybrid proteins from Escherichia coli
Colin Campbell
Gene, 1989
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Distinctive attributes for predicted secondary structures at terminal sequences of non-classically secreted proteins from proteobacteria
Peteris Zikmanis
Central European Journal of Biology, 2008
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Boris Feld
Antimicrobial Agents and Chemotherapy, 2000
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Identification of a gene fragment which codes for the 364 amino-terminal amino acid residues of a SecA homologue from Bacillus subtilis: further evidence for the conservation of the protein export apparatus in gram-positive and gram-negative bacteria
Michael Klein
MGG Molecular & General Genetics, 1991
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Dr. Srinivasan Ramachandran
BMC Genomics, 2006
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A procedure for amino acid sequencing in internal regions of proteins
Itai Benhar
Gene, 1991
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