Transcriptional and epigenetic signatures of zygotic genome activation during early drosophila embryogenesis (original) (raw)

Unmasking Activation of the Zygotic Genome Using Chromosomal Deletions in the Drosophila Embryo

Saeed Tavazoie, Eric Wieschaus

PLoS Biology, 2007

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CLAMP regulates zygotic genome activation in Drosophila embryos

Girish Deshpande

Genetics, 2021

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Zelda Binding in the Early Drosophila melanogaster Embryo Marks Regions Subsequently Activated at the Maternal-to-Zygotic Transition

Xiao-yong Li

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Noncanonical Compensation of Zygotic X Transcription in Early Drosophila melanogaster Development Revealed through Single-Embryo RNA-Seq

Gary Schroth

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ATAC-seq footprinting unravels kinetics of transcription factor binding during zygotic genome activation

Anastasiia Petrova

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Beyond accessibility: ATAC-seq footprinting unravels kinetics of transcription factor binding during zygotic genome activation

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2019

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Temporal Coordination of Gene Networks by Zelda in the Early Drosophila Embryo

Yujia Sun

PLoS Genetics, 2011

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Correction: Unmasking Activation of the Zygotic Genome Using Chromosomal Deletions in the Drosophila Embryo

Eric Wieschaus

PLoS Biology, 2007

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Author response: CLAMP and Zelda function together to promote Drosophila zygotic genome activation

Girish Deshpande

2021

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CLAMP and Zelda function together to promote Drosophila zygotic genome activation

Erica Larschan

eLife, 2021

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Embryonic transcription is controlled by maternally defined chromatin state

S. Hontelez

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Integrative analysis of the zinc finger transcription factor Lame duck in the Drosophila myogenic gene regulatory network

Leila Shokri

Proceedings of the National Academy of Sciences, 2012

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Prepatterning of Developmental Gene Expression by Modified Histones before Zygotic Genome Activation

ferenc mueller

Developmental Cell, 2011

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Chromatin signature of embryonic pluripotency is established during genome activation

Farhad Imam

Nature, 2010

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Grainyhead and Zelda compete for binding to the promoters of the earliest-expressed Drosophila genes

Michael Botchan

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Dynamic reprogramming of chromatin accessibility during Drosophila embryo development

Richard Sandstrom

Genome Biology, 2011

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Tissue-specific analysis of chromatin state identifies temporal signatures of enhancer activity during embryonic development

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Nature Genetics, 2012

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Regulation of zygotic gene expression in Drosophila primordial germ cells

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Current Biology, 1998

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Dynamics of enhancer chromatin signatures mark the transition from pluripotency to cell specification during embryogenesis

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Genome Research, 2012

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Transcription Factors Bind Thousands of Active and Inactive Regions in the Drosophila Blastoderm

Venky Iyer

PLoS Biology, 2008

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The time to measure positional information: maternal Hunchback is required for the synchrony of the Bicoid transcriptional response at the onset of zygotic transcription

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Temporal regulation of gene expression in the blastoderm Drosophila embryo

G. Yasuda

Genes & Development, 1991

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CBS: an open platform that integrates predictive methods and epigenetics information to characterize conserved regulatory features in multiple Drosophila genomes

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Maternal LSD1/KDM1A is an essential regulator of chromatin and transcription landscapes during zygotic genome activation

Edith Heard

eLife, 2016

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Cis-regulatory chromatin loops arise before TADs and gene activation, and are independent of cell fate during early Drosophila development

Sergio Espinola

Nature Genetics, 2021

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Identification of tightly regulated groups of genes during Drosophila melanogaster embryogenesis

Eileen Furlong

Molecular Systems Biology, 2007

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Deciphering a transcriptional regulatory code: modeling short-range repression in the Drosophila embryo

Evan Dayringer

Molecular Systems Biology, 2010

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A code for transcription initiation in mammalian genomes

Eivind Valen

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The role of maternal pioneer factors in predefining first zygotic responses to inductive signals

Thomas Spruce

2018

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Drosophila epigenome reorganization during oocyte differentiation and early embryogenesis

Nicola Iovino

Briefings in functional genomics, 2014

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The cis-regulatory dynamics of embryonic development at single cell resolution

Eileen Furlong

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Increased robustness of early embryogenesis through collective decision-making by key transcription factors

Mehdi Sadeghi

BMC Systems Biology, 2015

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