Patterns of diversification in two species of short-tailed bats (Carollia Gray, 1838): the effects of historical fragmentation of Brazilian rainforests (original) (raw)
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Comparative phylogeography of short-tailed bats (Carollia: Phyllostomidae)
Molecular Ecology, 2003
This is the first study of comparative phylogeography involving closely related species of Neotropical bats of the family Phyllostomidae. We compared patterns of geographical variation within the five species of fruit-eating bats currently recognized in the genus Carollia using the complete mitochondrial cytochrome -b gene. Our results suggest that the combined effect of the uplift of the Andes and the Panamanian land bridge has been as important for bats as for terrestrial mammals in shaping present-day biodiversity in the New World tropics. Species in this genus can be arranged in two highly supported clades, with a deep subdivision within each that corresponds well to differences across the Andes. We found three congruent phylogeographical patterns across species in this genus. First, the closer relationship between samples from western Ecuador and those from Central America, compared with populations east of the Andes in C. brevicauda , C. castanea and C. perspicillata . Second, the likelihood of a similar timing in South America for the arrival and diversification of C. brevicauda and C. perspicillata from their Central America ancestors. Third, the expansion of C. perspicillata and C. sowelli into northwestern Central America in the relatively recent past. Using a molecular clock, with rates ranging from 2.3 to 5% per 10 6 years, diversification within Carollia would have occurred over the last 1-4.5 Myr. These estimates agree well with the last rise of the Northern Andes and the Panama isthmus.
Unveiling the Hidden Bat Diversity of a Neotropical Montane Forest
PLOS ONE, 2016
Mountain environments, characterized by high levels of endemism, are at risk of experiencing significant biodiversity loss due to current trends in global warming. While many acknowledge their importance and vulnerability, these ecosystems still remain poorly studied, particularly for taxa that are difficult to sample such as bats. Aiming to estimate the amount of cryptic diversity among bats of a Neotropical montane cloud forest in Talamanca Range-southeast Central America-, we performed a 15-night sampling campaign, which resulted in 90 captured bats belonging to 8 species. We sequenced their mitochondrial cytochrome c oxidase subunit I (COI) and screened their inter-and intraspecific genetic variation. Phylogenetic relations with conspecifics and closely related species from other geographic regions were established using Maximum Likelihood and Bayesian inference methods, as well as median-joining haplotype networks. Mitochondrial lineages highly divergent from hitherto characterized populations (> 9% COI dissimilarity) were found in Myotis oxyotus and Hylonycteris underwoodi. Sturnira burtonlimi and M. keaysi also showed distinct mitochondrial structure with sibling species and/or populations. These results suggest that mountains in the region hold a high degree of endemicity potential that has previously been ignored in bats. They also warn of the high extinction risk montane bats may be facing due to climatic change, particularly in isolated mountain systems like Talamanca Range.
Acta Chiropterologica, 2018
Wagner’s mustached bat (Pteronotus personatus) is an insectivorous bat distributed throughout America from Mexico to Brazil, which inhabits a range of habitats from rain forests to dry deciduous forests. There are two currently recognized species within the P. personatus complex, for which we examined 235 cytochrome oxidase I (COI) sequences and 138 cytochrome b (Cytb) sequences in order to explore its genetic variation in Mexico as well as in Central and South America. Our results reveal considerable differences in the genetic structure inside this species complex, indicating five genetic lineages: 1) Gulf of Mexico and the Mexican Pacific coastal plain to the Isthmus of Tehuantepec, 2) Southeastern Mexico, 3) Guatemala, 4) Guyana and Suriname-COI/Guyana and Venezuela-Cytb, and 5) Guyana, Suriname, French Guiana and Brazil. In addition, we used the isolation-with-migration coalescent method to estimate divergence times. The results indicate that vicariant events occurred roughly 1,624,000–2,450,000 years ago during the Early Pleistocene, wherein Central America was the center of two separate diversification processes, one toward Mexico and the other South America. The intraspecific lineages obtained for P. personatus demonstrate the need to reevaluate the species complex limits of this taxon.
Diversity, 2021
Two sibling bare-backed bat species (Pteronotus fulvus and P. gymnonotus) have been traditionally differentiated by their size. However, intermediate specimens between the two species have been found in sympatric populations along southern Mexico and it has been suggested that they may be the outcome of a hybridization process between the two species. We used one mitochondrial (COI), three nuclear markers (PRKCL, STAT5A and RAG2) and 13 microsatellites to explore the evolutionary relationships between these two species and elucidate whether the intermediate morphotypes correspond to hybrid individuals. These markers have been analyzed in sympatric and allopatric populations of the two species plus the closely related species Pteronotus davyi. We confirmed the species-level differentiation of the three lineages (P. fulvus, P. davyi and P. gymnonotus), but the phylogenetic hypotheses suggested by the nuclear and mitochondrial markers were discordant. We confirm that the discordance between markers is due to genetic introgression through the mitochondrial capture of P. fulvus in P. gymnonotus populations. Such introgression was found in all P. gymnonotus specimens across its sympatric distribution range (Mexico to Costa Rica) and is related to expansion/retraction species distribution pulses associated with changes in forest distribution during the Quaternary climate cycles. Microsatellite analyses showed contemporary genetic contact between the two sympatric species and 3.0% of the samples studied were identified as hybrids. In conclusion, we found a historical and asymmetric genetic introgression (through mitochondrial capture) of P. fulvus into P. gymnonotus in Mexico and Central America and a limited contemporary gene exchange between the two species. However, no relationship was found between hybridization and the intermediate-sized specimens from southern Mexico, which might likely result from a clinal variation with latitude. These results confirm the need for caution when using forearm size to identify these species in the field and when differentiating them in the laboratory based on mitochondrial DNA alone.
The Old World leaf-nosed bats (Hipposideridae) are aerial and gleaning insectivores that occur throughout the Paleotropics. Both their taxonomic and phylogenetic histories are confused. Until recently, the family included genera now allocated to the Rhinonycteridae and was recognized as a subfamily of Rhinolophidae. Evidence that Hipposideridae diverged from both Rhinolophidae and Rhinonycteridae in the Eocene confirmed their family rank, but their intrafamilial relationships remain poorly resolved. We examined genetic variation in the Afrotropical hipposiderids Doryrhina, Hipposideros, and Macronycteris using relatively dense taxon-sampling throughout East Africa and neighboring regions. Variation in both mitochondrial (cyt-b) and four nuclear intron sequences (ACOX2, COPS, ROGDI, STAT5) were analyzed using both maximum likelihood and Bayesian inference methods. We used intron sequences and the lineage delimitation method BPP-a multilocus, multi-species coalescent approach-on supported mitochondrial clades to identify those acting as independent evolutionary lineages. The program StarBEAST was used on the intron sequences to produce a species tree of the sampled Afrotropical hipposiderids. All genetic analyses strongly support generic monophyly, with Doryrhina and Macronycteris as Afrotropical sister genera distinct from a Paleotropical Hipposideros; mitochondrial analyses interpose the genera Aselliscus, Coelops, and Asellia between these clades. Mitochondrial analyses also suggest at least two separate
The Old World leaf-nosed bats (Hipposideridae) are aerial and gleaning insectivores that occur throughout the Paleotropics. Both their taxonomic and phylogenetic histories are confused. Until recently, the family included genera now allocated to the Rhinonycteridae and was recognized as a subfamily of Rhinolophidae. Evidence that Hipposideridae diverged from both Rhinolophidae and Rhinonycteridae in the Eocene confirmed their family rank, but their intrafamilial relationships remain poorly resolved. We examined genetic variation in the Afrotropical hipposiderids Doryrhina, Hipposideros, and Macronycteris using relatively dense taxon-sampling throughout East Africa and neighboring regions. Variation in both mitochondrial (cyt-b) and four nuclear intron sequences (ACOX2, COPS, ROGDI, STAT5) were analyzed using both maximum likelihood and Bayesian inference methods. We used intron sequences and the lineage delimitation method BPP-a multilocus, multi-species coalescent approach-on supported mitochondrial clades to identify those acting as independent evolutionary lineages. The program StarBEAST was used on the intron sequences to produce a species tree of the sampled Afrotropical hipposiderids. All genetic analyses strongly support generic monophyly, with Doryrhina and Macronycteris as Afrotropical sister genera distinct from a Paleotropical Hipposideros; mitochondrial analyses interpose the genera Aselliscus, Coelops, and Asellia between these clades. Mitochondrial analyses also suggest at least two separate
The Old World leaf-nosed bats (Hipposideridae) are aerial and gleaning insectivores that occur throughout the Paleotropics. Both their taxonomic and phylogenetic histories are confused. Until recently, the family included genera now allocated to the Rhinonycteridae and was recognized as a subfamily of Rhinolophidae. Evidence that Hipposideridae diverged from both Rhinolophidae and Rhinonycteridae in the Eocene confirmed their family rank, but their intrafamilial relationships remain poorly resolved. We examined genetic variation in the Afrotropical hipposiderids Doryrhina, Hipposideros, and Macronycteris using relatively dense taxon-sampling throughout East Africa and neighboring regions. Variation in both mitochondrial (cyt-b) and four nuclear intron sequences (ACOX2, COPS, ROGDI, STAT5) were analyzed using both maximum likelihood and Bayesian inference methods. We used intron sequences and the lineage delimitation method BPP-a multilocus, multi-species coalescent approach-on supported mitochondrial clades to identify those acting as independent evolutionary lineages. The program StarBEAST was used on the intron sequences to produce a species tree of the sampled Afrotropical hipposiderids. All genetic analyses strongly support generic monophyly, with Doryrhina and Macronycteris as Afrotropical sister genera distinct from a Paleotropical Hipposideros; mitochondrial analyses interpose the genera Aselliscus, Coelops, and Asellia between these clades. Mitochondrial analyses also suggest at least two separate
Divergence times and origin of neotropical sheath-tailed bats (Tribe Diclidurini) in South America
Molecular Phylogenetics and Evolution, 2007
Times of divergence and origin of sheath-tailed bats (family Emballonuridae) in the New World were approximated with a relaxed molecular clock approach using Bayesian analysis of introns from the three nuclear genetic transmission systems in mammals (autosomal, X and Y sex chromosomes). An upper constraint of 30 mya for the oldest known Neotropical emballonurid fossil and a lower constraint of 13 mya for the only pre-Pleistocene fossil of an extant genus were used as calibration points. Differentiation began in the Late Oligocene with the appearance of two subtribes as independently corroborated by each gene. Following an explosive model of evolution, the genera diversified relatively suddenly in the Early Miocene with seven of the eight genera radiating within 1.4 myr and most intrageneric speciation occurring before the Pliocene. Optimization of ancestral areas onto the phylogeny suggests that the ancestor of New World emballonurid bats has its origin in Africa and this is the third report of placental mammals colonizing South America by trans-Atlantic dispersal and subsequent speciation in allopatry.
Bat assemblage in savanna remnants of Sonora, central-western Brazil
Biota Neotropica, 2011
The Cerrado (savanna) is a wide Neotropical formation, but the knowledge on the occurrence and distribution of bat species for this phytogeographic region is scarce, especially in the western portion. Here we address what are the bat species and their relative abundances in a western Cerrado site, municipality of Sonora, Mato Grosso do Sul, Brazil. Bats were mist-netted in eight non consecutive months over the course of two years. Sampled bats (n = 507) belonged to 18 species. The estimator Jackknife 1 estimated 22 species, and diversity (H') was 1.6. Richness and diversity of bats in Sonora were slightly higher than in the southern Cerrado, and similar to or lower than in the central Cerrado. Frugivorous species predominated, as expected, however richness and abundance of nectarivorous were unexpectedly high. Carollia perspicillata was the dominant species. The endemic bat Lonchophylla dekeyseri was highly abundant in Sonora, which enhances the importance of conserving the savanna remnants in this region. Comunidade de morcegos em remanescentes de savana em Sonora, centro-oeste do Brasil. Biota Neotrop. 11(3): http://www.biotaneotropica.org.br/v11n3/pt/abstract?in ventory+bn03311032011