Consensus sequences based on plurality rule (original) (raw)

On the consistency of the plurality rule consensus function for molecular sequences

Fred McMorris

Journal of Classification, 1994

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Interpreting consensus sequences based on plurality rule

Fred McMorris

Mathematical Biosciences, 1992

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Consensus functions and patterns in molecular sequences

Boris Mirkin

Bulletin of Mathematical Biology, 1993

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Threshold consensus methods for molecular sequences

Fred McMorris

Journal of Theoretical Biology, 1992

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The asymptotic plurality rule for molecular sequences

Ewa Kubicka

1996

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Analysing molecular sequences using consensus

Fred McMorris

New Zealand Journal of Botany, 1993

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Pattern recognition in several sequences: Consensus and alignment

David Galas

Bulletin of Mathematical Biology, 1984

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A linear programming approach for identifying a consensus sequence on DNA sequences

HanLin Li

Bioinformatics, 2005

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Consensus Sequence Zen

Thomas D Schneider

Applied Bioinformatics, 2002

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Banishing bias from consensus sequences

Amir Ben-dor

Lecture Notes in Computer Science, 1997

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A simulated annealing algorithm for finding consensus sequences

Jonathan M Keith

Bioinformatics, 2002

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New voting strategies designed for the classification of nucleic sequences

Mourad Elloumi

Knowledge and Information Systems, 2005

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GRASP with path-relinking for some molecular biology consensus problems

Julio Alves

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Optimizing Consensus Generation Algorithms for Highly Variable Amino Acid Sequence Clusters

Reyhaneh Mohabati

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Reoptimization of the Consensus Pattern Problem under Pattern Length Modification

Richelle Ann Juayong

2019

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The Relative Inefficiency of Sequence Weights in Determining a Nucleotide Consensus Distribution

Charles Lawrence

2003

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Sequence logos: a new way to display consensus sequences

Thomas D Schneider

Nucleic acids research, 1990

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Information Content of Sets of Biological Sequences Revisited

Stefan Engelen

2009

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Some measures of consensus generated by distances on weak orders

José Luis García-Lapresta

XIV Congreso Espanol …, 2008

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Nonbinary Counterparts of the Prefer-Same and Prefer-Opposite de Bruijn Sequences

Abbas Alhakim

arXiv (Cornell University), 2022

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Constrained pairwise and center-star sequences alignment problems

Francis Chin

Journal of Combinatorial Optimization, 2015

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Measuring Consensus in Weak Orders

David Roman

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A complexity measure for symbolic sequences and applications to DNA

Pedro Lamberti

2006

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Identification of consensus RNA secondary structures using suffix arrays

Mohammad Anwar

BMC Bioinformatics, 2006

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The weighted suffix tree: an efficient data structure for handling molecular weighted sequences and its applications

Christos Makris

Fundamenta …, 2006

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Consensus Rules Based on Decisive Families

Fred McMorris

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Finding the most probable string and the consensus string: an algorithmic study

Jose Oncina

2011

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Enumerating suboptimal alignments of multiple biological sequences efficiently

Hiroshi Imai

Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing, 1997

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Consistent Equivalence Relations: a Set-Theoretical Framework for Multiple Sequence Alignment

Andreas Dress

1999

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Mapping Equivalence for Symbolic Sequences: Theory and Applications

Dan Schonfeld

2009

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VisCoSe: visualization and comparison of consensus sequences

Stefan Lorkowski

Bioinformatics, 2004

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Identification of consensus patterns in unaligned dna and protein sequences: a large-deviation stati

Gary Stormo

1995

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Further results on neutral consensus functions

Robert Powers

Mathématiques et sciences humaines, 1995

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Efficient Algorithms for Handling Molecular Weighted Sequences

Christos Makris

IFIP International Federation for Information Processing, 2004

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