Interpreting consensus sequences based on plurality rule (original) (raw)

On the consistency of the plurality rule consensus function for molecular sequences

Fred McMorris

Journal of Classification, 1994

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The asymptotic plurality rule for molecular sequences

Ewa Kubicka

1996

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Analysing molecular sequences using consensus

Fred McMorris

New Zealand Journal of Botany, 1993

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Threshold consensus methods for molecular sequences

Fred McMorris

Journal of Theoretical Biology, 1992

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Consensus functions and patterns in molecular sequences

Boris Mirkin

Bulletin of Mathematical Biology, 1993

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Consensus sequences based on plurality rule

Fred McMorris

Bulletin of Mathematical Biology, 1992

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A linear programming approach for identifying a consensus sequence on DNA sequences

HanLin Li

Bioinformatics, 2005

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The Relative Inefficiency of Sequence Weights in Determining a Nucleotide Consensus Distribution

Charles Lawrence

2003

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Identification of consensus patterns in unaligned dna and protein sequences: a large-deviation stati

Gary Stormo

1995

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Pattern recognition in several sequences: Consensus and alignment

David Galas

Bulletin of Mathematical Biology, 1984

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Identifying features in biological sequences: Sixth workshop report

William Pearson

1995

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Identification of consensus patterns in unaligned DNA sequences known to be functionally related

G Z

Bioinformatics/computer Applications in The Biosciences, 1990

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Banishing bias from consensus sequences

Amir Ben-dor

Lecture Notes in Computer Science, 1997

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Information Content of Sets of Biological Sequences Revisited

Stefan Engelen

2009

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Statistical Dependence in Biological Sequences

Ioannis Kontoyiannis

2007 IEEE International Symposium on Information Theory, 2007

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Alignment-Free Sequence Comparison (II): Theoretical Power of Comparison Statistics

Gesine Reinert

Journal of Computational Biology, 2010

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Biomolecular sequence analysis: pattern acquisition and frequency counts

Andrzej K Konopka

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VisCoSe: visualization and comparison of consensus sequences

Stefan Lorkowski

Bioinformatics, 2004

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Multipattern Consensus Regions in Multiple Aligned Protein Sequences and Their Segmentation

David Chiu

EURASIP Journal on Bioinformatics and Systems Biology, 2006

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Solving the protein sequence metric problem

William Atchley

Proceedings of the National Academy of Sciences, 2005

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Identification of consensus RNA secondary structures using suffix arrays

Mohammad Anwar

BMC Bioinformatics, 2006

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Optimizing Consensus Generation Algorithms for Highly Variable Amino Acid Sequence Clusters

Reyhaneh Mohabati

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GRASP with path-relinking for some molecular biology consensus problems

Julio Alves

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A base composition analysis of natural patterns for the preprocessing of metagenome sequences

Oliver Bonham-Carter, Hesham Ali

BMC Bioinformatics, 2013

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Multiple alignment-free sequence comparison

G. Reinert

Bioinformatics, 2013

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The weighted suffix tree: an efficient data structure for handling molecular weighted sequences and its applications

Christos Makris

Fundamenta …, 2006

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Consistency of Sequence-Based Gene Clusters

Murray Patterson, Jens Stoye

Journal of Computational Biology, 2011

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Efficient Algorithms for Handling Molecular Weighted Sequences

Christos Makris

IFIP International Federation for Information Processing, 2004

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Toward a statistically explicit understanding of de novo sequence assembly

Casey Dunn

Bioinformatics, 2013

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New scoring schema for finding motifs in DNA Sequences

Bahram Goliaei

BMC Bioinformatics, 2009

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