Rapid de novo evolution of lysis genes in single-stranded RNA phages (original) (raw)

Rethinking the Evolution of Single-Stranded RNA (ssRNA) Bacteriophages Based on Genomic Sequences and Characterizations of Two R-Plasmid-Dependent ssRNA Phages, C-1 and Hgal1

Sherin Kannoly

Journal of Bacteriology, 2012

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Genomic Sequences of Two Novel Levivirus Single-Stranded RNA Coliphages (Family Leviviridae): Evidence for Recombination in Environmental Strains

Stephanie Friedman

Viruses, 2012

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A carrier state is established in Pseudomonas aeruginosa by phage LeviOr01, a newly isolated ssRNA levivirus

gilles vergnaud

Journal of General Virology

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A Forward-Genetic Screen and Dynamic Analysis of Lambda Phage Host-Dependencies Reveals An Extensive Interaction Network and a New Anti-Viral …

Elsa W Birch

PLoS Genet, 2010

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A Forward-Genetic Screen and Dynamic Analysis of Lambda Phage Host-Dependencies Reveals an Extensive Interaction Network and a New Anti-Viral Strategy

Miriam Gutschow

PLoS Genetics, 2010

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Genome-wide expression dynamics of a marine virus and host reveal features of co-evolution

Robert Steen

Nature, 2007

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S2.0 S0092867401006377 main Phage Genomics: Small Is Beautiful

Armando Ruiz

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Paving the Way to Unveil the Diversity and Evolution of Phage Genomes

Martha Vives

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A bioinformatic analysis of ribonucleotide reductase genes in phage genomes and metagenomes

Bingjie Xue

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Gene Mapping and Phylogenetic Analysis of the Complete Genome from 30 Single-Stranded RNA Male-Specific Coliphages (Family Leviviridae)

Mark Sobsey

Journal of Virology, 2009

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Analysis of metagenome-assembled viral genomes from the human gut reveals diverse putative CrAss-like phages with unique genomic features

Mikhail Rayko

Nature Communications, 2021

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The Genome of Bacteriophage K1F, a T7-Like Phage That Has Acquired the Ability To Replicate on K1 Strains of Escherichia coli

Carl Merril

Journal of Bacteriology, 2005

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A new Microviridae phage isolated from a failed biotechnological process driven by Escherichia coli

Jacques Corbeil

Applied and environmental microbiology, 2014

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Exploiting what phage have evolved to control gram-positive pathogens

Vincent Fischetti

Bacteriophage, 2011

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Horizontal Gene Transfer and the Evolution of Microvirid Coliphage Genomes

Darin Rokyta

Journal of Bacteriology, 2006

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Comparative genomics of four closely related Clostridium perfringens bacteriophages reveals variable evolution among core genes with therapeutic potential

Bruce Seal

BMC Genomics, 2011

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Evolutionary stability of a refactored phage genome

Ian Molineux

ACS synthetic biology, 2012

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Reticulate Representation of Evolutionary and Functional Relationships between Phage Genomes

Gipsi Lima

Molecular Biology and Evolution, 2008

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The genome of bacteriophage φKMV, a T7-like virus infecting Pseudomonas aeruginosa

Lidia Kurochkina

Virology, 2003

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Genomes of the T4-related bacteriophages as windows on microbial genome evolution

Vasiliy Petrov

Virology Journal, 2010

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Evolutionary history of bacteriophages with double-stranded DNA genomes

Galina Glazko

Biology Direct, 2007

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Cross-Regulation between Bacteria and Phages at a Posttranscriptional Level

Shoshy Altuvia

Microbiology Spectrum, 2018

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Long-range translational coupling in single-stranded RNA bacteriophages: an evolutionary analysis

Normunds Līcis

Nucleic Acids Research, 1998

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VAPEX: an interactive web server for the deep exploration of natural virus and phage genomes

augustin degaugue

Bioinformatics

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Progress toward a reduced phage genetic code

Angad Mehta

Bioorganic & medicinal chemistry, 2018

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Thousands of small, novel genes predicted in global phage genomes

Ann M Hirsch

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Single-stranded RNA phages ToC

Paul Pumpens

Single-Stranded RNA Phages: From Molecular Biology to Nanotechnology, 2020

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Zombies in Bacterial Genomes: Identification and Analysis of Previously Virulent Phage

Scott Mitchell

2014

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Virus Evolution toward Limited Dependence on Nonessential Functions of the Host: the Case of Bacteriophage SPP1

Virginija Cvirkaitė-krupovič

Journal of Virology, 2014

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O'Flaherty et al JBact Genome Phage K.pdf

Aidan Coffey

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Next-Generation “-omics” Approaches Reveal a Massive Alteration of Host RNA Metabolism during Bacteriophage Infection of Pseudomonas aeruginosa

Peter Jorth

PLOS Genetics, 2016

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Genome of Bacteriophage P1

Malgorzata Lobocka

Journal of Bacteriology, 2004

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Lessons from bacteriophages part 1: Deriving utility from protein structure, function, and evolution

Carolyn Teschke

PLOS Pathogens, 2018

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