Articles The Solvent-Protected Core of the Hairpin Ribozyme-Substrate Complex† (original) (raw)

Biochemistry, 2003

A Base Change in the Catalytic Core of the Hairpin Ribozyme Perturbs Function but Not Domain Docking

Biochemistry, 2001

Solvent Structure and Hammerhead Ribozyme Catalysis

Tai-sung Lee

Chemistry & Biology, 2008

Metal ions play a passive role in the hairpin ribozyme catalysed reaction

Jane Grasby

Nucleic acids research, 1997

Evidence for the role of active site residues in the hairpin ribozyme from molecular simulations along the reaction path

Pawel Janowski, Hugh Heldenbrand

Journal of the American Chemical Society, 2014

Single-Atom Imino Substitutions at A9 and A10 Reveal Distinct Effects on the Fold and Function of the Hairpin Ribozyme Catalytic Core

Robert Spitale

Biochemistry, 2009

The Hairpin Ribozyme

Nucleic Acids and Molecular Biology, 1994

Ionic requirements for RNA binding, cleavage, and ligation by the hairpin ribozyme

Biochemistry, 1993

Capturing Hammerhead Ribozyme Structures in Action by Modulating General Base Catalysis

Young-In Chi

PLoS Biology, 2008

Tertiary structure formation in the hairpin ribozyme monitored by fluorescence resonance energy transfer

Embo Journal, 1998

The hammerhead, hairpin and VS ribozymes are catalytically proficient in monovalent cations alone

Chemistry & Biology, 1998

QM/MM Studies of Hairpin Ribozyme Self-Cleavage Suggest the Feasibility of Multiple Competing Reaction Mechanisms

Vojtěch Mlýnský, Nils Walter

The Journal of Physical Chemistry B, 2011

Cation-Specific Structural Accommodation within a Catalytic RNA

Biochemistry, 2006

Faculty of 1000 evaluation for Capturing hammerhead ribozyme structures in action by modulating general base catalysis

Pascale Legault

F1000 - Post-publication peer review of the biomedical literature, 2008

Sequence elements outside the catalytic core of natural hairpin ribozymes modulate the reactions differentially

Gerhard Steger

Biological Chemistry, 2011

Involvement of a Specific Metal Ion in the Transition of the Hammerhead Ribozyme to Its Catalytic Conformation

Leonid Beigelman, Alessio Peracchi

Journal of Biological Chemistry, 1997

Structural Basis for the Guanosine Requirement of the Hairpin Ribozyme †

Biochemistry, 1999

Modifications and deletions of helices within the hairpin ribozyme-substrate complex: An active ribozyme lacking helix 1

RNA, 2004

The hairpin ribozyme substrate binding-domain: A highly constrained D-shaped conformation 1 1 Edited by J. A. Doudna

Journal of Molecular Biology, 2001

Extensive Molecular Dynamics Simulations Showing That Canonical G8 and Protonated A38H⁺ Forms Are Most Consistent with Crystal Structures of Hairpin Ribozyme

Journal of Physical Chemistry B, 2010

The hairpin ribozyme substrate binding-domain: A highly constrained D-shaped conformation

Journal of Molecular Biology, 2001

The hairpin ribozyme substrate binding-domain: A highly constrained D-shaped conformation1

Journal of Molecular Biology, 2001

Structural basis for heterogeneous kinetics: Reengineering the hairpin ribozyme

Proceedings of the National Academy of Sciences, 1998

Functional involvement of G8 in the hairpin ribozyme cleavage mechanism

The EMBO Journal, 2001

Molecular dynamics suggest multifunctionality of an adenine imino group in acid-base catalysis of the hairpin ribozyme

RNA, 2009

Extensive Molecular Dynamics Simulations Showing That Canonical G8 and Protonated A38H + Forms Are Most Consistent with Crystal Structures of Hairpin Ribozyme

The Journal of Physical Chemistry B, 2010

Rapid Steps in the glmS Ribozyme Catalytic Pathway: Cation and Ligand Requirements

Biochemistry, 2011

Kinetic Mechanism of the Hairpin Ribozyme

Journal of Biological Chemistry, 1997

Ribozyme Catalysis Revisited: Is Water Involved?

Molecular Cell, 2007

Structural effects of nucleobase variations at key active site residue Ade38 in the hairpin ribozyme

Joseph Wedekind

RNA (New York, N.Y.), 2008