Escherichia coli and Pseudomonas putida RNA polymerases display identical contacts with promoters (original) (raw)

E. coli RNA polymerase interacts homologously with two different promoters

W. Gilbert

Cell, 1980

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Promoter recognition by Escherichia coli RNA polymerase

Pieter Dehaseth

Journal of Molecular Biology, 1989

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RNA polymerase-promoter interactions: the comings and goings of RNA polymerase

Pieter Dehaseth

Journal of bacteriology, 1998

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Interaction of Escherichia coli RNA polymerase with promoters of several coliphage and plasmid DNAs

Alexander Von Gabain

Proceedings of the National Academy of Sciences, 1979

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Promoter recognition by Escherichia coli RNA polymerase. Effects of single base pair deletions and insertions in the spacer DNA separating the -10 and -35 regions are dependent on spacer DNA sequence

Pieter Dehaseth, M. Strainic

Biochemistry, 1993

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RNA-polymerase binding at the promoters of the rRNA genes of Escherichia coli

Ibolya Kiss

Biochimica et Biophysica Acta (BBA) - Nucleic Acids and Protein Synthesis, 1980

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Altered promoter recognition by mutant forms of the ?70 subunit of Escherichia coli RNA polymerase*1

Deborah Siegele

J Mol Biol, 1989

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Flexibility of the DNA enhances promoter affinity of Escherichia coli RNA polymerase

Hermann Heumann

The EMBO Journal, 1991

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Topography of interaction of Escherichia coli RNA polymerase subunits with lac UV5 promoter

Robert Bibilashvili

FEBS Letters, 1981

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DNA functional groups required for formation of open complexes between Escherichia coli RNA polymerase and the λ P(R) promoter. Identification via base analog substitutions

Pieter Dehaseth

Journal of Biological Chemistry

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Non-canonical sequence elements in the promoter structure. Cluster analysis of promoters recognized by Escherichia coli RNA polymerase

Maria Thomas

Nucleic Acids Research, 1997

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Structure of open promoter complexes with Escherichia coli RNA polymerase as revealed by the DNase I footprinting technique: compilation analysis

O. Ozoline

Nucleic Acids Research, 1995

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Interaction of bacterial RNA-polymerase with two different promoters of phage T7 DNA. Conformational analysis

O. Ozoline

Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression, 1993

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Contacts between Escherichia coli RNA polymerase and thymines in the lac UV5 promoter

Ulrich Siebenlist

Proceedings of the National Academy of Sciences, 1979

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Homologous RNA polymerase binding to Escherichia coli DNA: a study of the distribution of stable binding sites

Francesco Pedone, P. Ballario

European journal of biochemistry / FEBS, 1978

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Nucleotides from -16 to -12 Determine Specific Promoter Recognition by Bacterial S-RNA Polymerase

Annie Kolb

Journal of Biological Chemistry, 2003

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In vitro transcription profiling of the S subunit of bacterial RNA polymerase: re-definition of the S regulon and identification of S-specific promoter sequence elements

Anna Maciag

Nucleic Acids Research, 2011

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RNA polymerase alpha subunit binding site in positively controlled promoters: a new model for RNA polymerase-promoter interaction and transcriptional activation in the Escherichia coli ada and aidB genes

Michael Volkert

The EMBO journal, 1995

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Altered promoter recognition by mutant forms of the σ70 subunit of Escherichia coli RNA polymerase

Deborah Siegele

Journal of Molecular Biology, 1989

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Strand Opening-deficient Escherichia coli RNA Polymerase Facilitates Investigation of Closed Complexes with Promoter DNA: EFFECTS OF DNA SEQUENCE AND TEMPERATURE

Pieter Dehaseth, V. Cook

Journal of Biological Chemistry, 2007

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Interactions ofEscherichia coliRNA Polymerase at Extended -10 Promoters

Stephen Minchin

Biochemical Society Transactions, 2000

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RNA Polymerases from Bacillus subtilis and Escherichia coli Differ in Recognition of Regulatory Signals In Vitro

Dick Burgess

Journal of Bacteriology, 2000

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Organization of Open Complexes at Escherichia coli Promoters. LOCATION OF PROMOTER DNA SITES CLOSE TO REGION 2.5 OF THE sigma 70 SUBUNIT OF RNA POLYMERASE

Stephen Minchin

Journal of Biological Chemistry, 1999

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Conformational Changes of Escherichia coli σ54-RNA-Polymerase upon Closed–Promoter Complex Formation

Marin Van Heel

Journal of Molecular Biology, 2005

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Comparison of promoter activities in Escherichia coli and Pseudomonas aeruginosa: use of a new broad-host-range promoter-probe plasmid

Andrew Bell

FEMS Microbiology Letters, 1990

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One-dimensional diffusion of Escherichia coli DNA-dependent RNA polymerase: a mechanism to facilitate promoter location

Hermann Heumann

Proceedings of the National Academy of Sciences, 1988

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Promoters Recognized by Escherichia coli RNA Polymerase Selected by Function: Highly Efficient Promoters from Bacteriophage T5 Downloaded from

Reiner Gentz

JOURNAL OF BACTERIOLOGY, Oct. p. 70-77, 1985

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An archaebacterial promoter sequence assigned by RNA polymerase binding experiments

Michael Thomm

Canadian Journal of Microbiology, 1989

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Interactions of T7 RNA polymerase with T7 late promoters measured by footprinting with methidiumpropyl-EDTA-iron(II)

Richard Burgess

Biochemistry, 1987

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Visualization of intermediary transcription states in the complex between Escherichia coli DNA-dependent RNA polymerases and a promoter-carrying DNA fragment using the gel retardation method

Hermann Heumann

European Journal of Biochemistry, 1986

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Cooperativity and interaction energy threshold effects in recognition of the -10 promoter element by bacterial RNA polymerase

Vladimir Mekler, Konstantin Severinov

Nucleic Acids Research, 2013

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