Gene Regulatory Networks: A Primer in Biological Processes and Statistical Modelling (original) (raw)

Assigning probabilities to qualitative dynamics of gene regulatory networks

Liliana Ironi

Journal of Mathematical Biology, 2014

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Modeling stochasticity and robustness in gene regulatory networks

Mich Mendoza

Bioinformatics/computer Applications in The Biosciences, 2009

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Network modelling of gene regulation

Joshua Ho

Biophysical Reviews, 2010

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Stochastic Modeling of Gene Regulatory Networks y

Linda Petzold

2000

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A mathematical framework for describing and analysing gene regulatory networks

Thomas Mestl

Journal of Theoretical Biology, 1995

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Inferring quantitative models of regulatory networks from expression data

Iftach Nachman

Bioinformatics, 2004

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A General Modeling Strategy for Gene Regulatory Networks with Stochastic Dynamics

Stuart Kauffman, Andre Ribeiro

Journal of Computational Biology, 2006

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Modelling the Regulation of Gene Expression in Genetic Regulatory Networks

Maria Schilstra

2001

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Causal Computational Models for Gene Regulatory Networks

Sumeet Agarwal

2016

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Algorithmic and Stochastic Representations of Gene Regulatory Networks and Protein-Protein Interactions

Athanasios T Alexiou

Current Topics in Medicinal Chemistry, 2019

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Mathematical Modelling of Gene Regulatory Networks

Ana Jurinjak Tusek

Applied Biological Engineering - Principles and Practice, 2012

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Computational and Statistical Approaches for Modeling of Proteomic and Genomic Networks

E. Serpedin

Advances in Bioinformatics, 2013

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Modeling Regulatory Networks with Weight Matrices

Gary Stormo

Biocomputing '99, 1998

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Statistical inference of the time-varying structure of gene-regulation networks

Michael P.H. Stumpf

BMC systems biology, 2010

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A Model of Gene Expression Based on Random Dynamical Systems Reveals Modularity Properties of Gene Regulatory Networks

Fernando Antoneli, Marcelo Briones

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Stochastic modelling of gene regulatory networks

Linda Petzold

International Journal of Robust and Nonlinear Control, 2005

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An Overview of the Statistical Methods Used for Inferring Gene Regulatory Networks and Protein-Protein Interaction Networks

Lotfi Chouchane, Erchin Serpedin

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Connecting quantitative regulatory-network models to the genome

Joseph Bockhorst, Mark Craven

Bioinformatics, 2007

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A stochastic differential equation model for transcriptional regulatory networks

Adriana Climescu Haulica

BMC Bioinformatics, 2007

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Stochastic Models and Numerical Algorithms for a Class of Regulatory Gene Networks

Thomas Fournier

Bulletin of Mathematical Biology, 2009

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Steady-state solution of probabilistic gene regulatory networks

Erol Gelenbe

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A Model-Based Tool for the Analysis and Design of Gene Regulatory Networks

Liliana Ironi

IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2018

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A stochastic differential equation model for transcriptional regulatory networks-0

Adriana Climescu Haulica

2011

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Stochastic Hybrid Models of Gene Regulatory Networks

Pavel Kurasov

arXiv (Cornell University), 2018

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Simulation of Gene Regulatory Networks

Bernard Ycart

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Computational studies of gene regulatory networks: in numero molecular biology

Hasty Hasty

Nature Reviews Genetics, 2001

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Survey on Modelling Methods Applicable to Gene Regulatory Network

Chanda Panse

International Journal on Bioinformatics & Biosciences, 2013

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