uncoverappLib (original) (raw)

This is the released version of uncoverappLib; for the devel version, seeuncoverappLib.

Interactive graphical application for clinical assessment of sequence coverage at the base-pair level

Bioconductor version: Release (3.20)

a Shiny application containing a suite of graphical and statistical tools to support clinical assessment of low coverage regions.It displays three web pages each providing a different analysis module: Coverage analysis, calculate AF by allele frequency app and binomial distribution. uncoverAPP provides a statisticl summary of coverage given target file or genes name.

Author: Emanuela Iovino [cre, aut], Tommaso Pippucci [aut]

Maintainer: Emanuela Iovino <emanuela.iovino at unibo.it>

Citation (from within R, enter citation("uncoverappLib")):

Installation

To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("uncoverappLib")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("uncoverappLib")

Details

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Package Archives

Follow Installation instructions to use this package in your R session.