Sushi domain (original) (raw)
Sushi domain is an evolutionarily conserved protein domain. It is also known as Complement control protein (CCP) modules or short consensus repeats (SCR). The name derives from the visual similarity of the domain to nigiri sushi when the primary structure is drawn showing the loops created by the disulfide bonds. CD21 (also called C3d receptor, CR2, Epstein Barr virus receptor or EBV-R) is the receptor for EBV and for C3d, C3dg and iC3b. Complement components may activate B cells through CD21. CD21 is part of a large signal-transduction complex that also involves CD19, CD81, and Leu13.
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| dbo:abstract | Sushi domain is an evolutionarily conserved protein domain. It is also known as Complement control protein (CCP) modules or short consensus repeats (SCR). The name derives from the visual similarity of the domain to nigiri sushi when the primary structure is drawn showing the loops created by the disulfide bonds. Sushi domains exist in a wide variety of complement and adhesion proteins. The structure is known for this domain; it is based on a beta-sandwich arrangement - one face made up of three β-strands hydrogen-bonded to form a triple-stranded region at its centre, and the other face formed from two separate β-strands. CD21 (also called C3d receptor, CR2, Epstein Barr virus receptor or EBV-R) is the receptor for EBV and for C3d, C3dg and iC3b. Complement components may activate B cells through CD21. CD21 is part of a large signal-transduction complex that also involves CD19, CD81, and Leu13. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins. Complement decay-accelerating factor (Antigen CD55) belongs to the Cromer blood group system and is associated with Cr(a), Dr(a), Es(a), Tc(a/b/c), Wd(a), WES(a/b), IFC and UMC antigens. Complement receptor type 1 (C3b/C4b receptor) (Antigen CD35) belongs to the Knops blood group system and is associated with Kn(a/b), McC(a), Sl(a) and Yk(a) antigens. (en) |
| dbo:symbol | Sushi |
| dbo:wikiPageID | 29155296 (xsd:integer) |
| dbo:wikiPageLength | 5211 (xsd:nonNegativeInteger) |
| dbo:wikiPageRevisionID | 997626825 (xsd:integer) |
| dbo:wikiPageWikiLink | dbr:F13B dbr:Beta-sandwich dbr:C1R dbr:C1S dbr:L-selectin dbr:Protein_primary_structure dbr:Thyroid_peroxidase dbr:TAOK1 dbr:SNED1 dbr:SEZ6 dbr:SRPX dbr:Complement_component_2 dbr:Complement_component_6 dbr:Complement_control_protein dbr:Complement_factor_B dbr:Complement_receptor_1 dbr:Complement_receptor_2 dbr:BF_(protein) dbr:B_cells dbr:GABBR1 dbr:SEZ6L dbr:PAPPA2 dbr:Haptoglobin dbr:Protein_domain dbr:Receptor_activity-modifying_protein dbc:Protein_domains dbc:Single-pass_transmembrane_proteins dbr:Disulfide dbr:C7_protein dbr:CD46 dbr:CFHR1 dbr:CFHR2 dbr:CFHR3 dbr:CFHR4 dbr:CFHR5 dbr:CSMD1 dbr:CSMD2 dbr:CSPG3 dbr:MASP2_(protein) dbr:Factor_H dbr:IL2RA dbr:SRPX2 dbr:Β-strand dbr:Selectin dbr:Nigirizushi dbr:BCAN dbr:Epstein_Barr_virus dbr:PAPPA dbr:SELE dbr:SELP dbr:Hydrogen-bond dbr:CD62L dbr:VCAN dbr:Decay_accelerating_factor dbr:APOH dbr:CD55 dbr:CD62E dbr:CD62P dbr:CSMD3 dbr:MASP1 dbr:SEZ6L2 dbr:AGC1 dbr:SEL-OB dbr:SVEP1 dbr:SUSD1 dbr:SUSD2 dbr:SUSD4 dbr:C4BPA dbr:C4BPB dbr:CR1L dbr:FHR4 dbr:KIAA0247 dbr:Psk-3 |
| dbp:cath | 1 (xsd:integer) |
| dbp:cdd | cd00033 (en) |
| dbp:interpro | IPR000436 (en) |
| dbp:name | Sushi domain (en) |
| dbp:pdb | :870-926 :870-926 F:99-157 A:86-143 A:86-143 C:86-143 B:86-143 A:86-143 P:163-220 A:163-220 B:163-220 P:163-220 P:163-220 B:163-220 P:163-220 E:163-220 B:163-220 A:163-220 A:163-220 B:163-220 A:163-220 P:163-220 A:113-170 A:1004-1061 A:1004-1061 A:1004-1061 A:1004-1061 A:99-156 A:99-156 A:84-137 A:84-137 A:1109-1163 A:162-223 :148-201 :148-201 :148-201 :931-984 C:23-82 A:23-82 A:389-442 A:300-361 B:309-371 A:366-430 A:376-447 A:376-447 A:359-421 B:24-82 A:24-82 A:24-82 D:24-82 (en) |
| dbp:pfam | PF00084 (en) |
| dbp:scop | 1 (xsd:integer) |
| dbp:symbol | Sushi (en) |
| dbp:wikiPageUsesTemplate | dbt:InterPro_content dbt:Reflist dbt:InterPro dbt:PDB3 dbt:Pfam_box |
| dcterms:subject | dbc:Protein_domains dbc:Single-pass_transmembrane_proteins |
| gold:hypernym | dbr:Domains |
| rdf:type | owl:Thing dbo:Biomolecule wikidata:Q206229 wikidata:Q8054 yago:WikicatSingle-passTransmembraneProteins yago:Abstraction100002137 yago:Attribute100024264 yago:Chemical114806838 yago:Compound114818238 yago:Environment113934596 yago:Macromolecule114944888 yago:Material114580897 yago:Matter100020827 yago:Molecule114682133 yago:OrganicCompound114727670 yago:Part113809207 yago:PhysicalEntity100001930 yago:Protein114728724 yago:Relation100031921 dbo:Protein yago:Situation113927383 yago:Sphere114514039 yago:State100024720 yago:Substance100019613 yago:Thing100002452 yago:Unit109465459 yago:WikicatProteinDomains |
| rdfs:comment | Sushi domain is an evolutionarily conserved protein domain. It is also known as Complement control protein (CCP) modules or short consensus repeats (SCR). The name derives from the visual similarity of the domain to nigiri sushi when the primary structure is drawn showing the loops created by the disulfide bonds. CD21 (also called C3d receptor, CR2, Epstein Barr virus receptor or EBV-R) is the receptor for EBV and for C3d, C3dg and iC3b. Complement components may activate B cells through CD21. CD21 is part of a large signal-transduction complex that also involves CD19, CD81, and Leu13. (en) |
| rdfs:label | Sushi domain (en) |
| owl:sameAs | freebase:Sushi domain yago-res:Sushi domain wikidata:Sushi domain dbpedia-fa:Sushi domain https://global.dbpedia.org/id/4vrxd |
| prov:wasDerivedFrom | wikipedia-en:Sushi_domain?oldid=997626825&ns=0 |
| foaf:isPrimaryTopicOf | wikipedia-en:Sushi_domain |
| is dbo:wikiPageWikiLink of | dbr:E-selectin dbr:Limulus_clotting_factor_C dbr:SNED1 dbr:Heligmosomoides_polygyrus dbr:CSMD1 dbr:Factor_XIII dbr:Selectin |
| is foaf:primaryTopic of | wikipedia-en:Sushi_domain |