| dbo:abstract |
TopFIND is the Termini oriented protein Function Inferred Database (TopFIND) is an integrated knowledgebase focused on protein termini, their formation by proteases and functional implications. It contains information about the processing and the processing state of proteins and functional implications thereof derived from research literature, contributions by the scientific community and biological databases. (en) |
| dbo:title |
TopFIND (en) |
| dbo:wikiPageExternalLink |
https://www.ubc.ca/ http://clipserve.clip.ubc.ca/topfind/ http://clip.ubc.ca http://langelab.med.ubc.ca http://merops.sanger.ac.uk/ https://www.uniprot.org/ |
| dbo:wikiPageID |
33178845 (xsd:integer) |
| dbo:wikiPageLength |
10415 (xsd:nonNegativeInteger) |
| dbo:wikiPageRevisionID |
995654856 (xsd:integer) |
| dbo:wikiPageWikiLink |
dbr:Metabolic_network_modelling dbr:Peptide dbr:UniProt dbr:University_of_British_Columbia dbr:Protein–protein_interaction dbc:Bioinformatics_software dbc:Post-translational_modification dbc:Protein_families dbr:Computational_genomics dbr:Creative_Commons dbr:SQL dbr:Enzyme_substrate_(biology) dbr:Protein-protein_interaction_prediction dbr:MEROPS dbr:Protease_inhibitor_(biology) dbc:Biological_databases dbc:Molecular_biology dbr:Cytoscape dbr:Database dbr:Protease dbr:Protein dbc:Protein_domains dbc:Mathematical_and_theoretical_biology dbr:Translation_(biology) dbc:Systems_biology dbr:Metadata dbr:XML dbr:Knowledgebase |
| dbp:author |
Philipp F. Lange (en) |
| dbp:center |
University of British Columbia , Canada (en) |
| dbp:citation |
TopFIND 2.0--linking protein termini with proteolytic processing and modifications altering protein function (en) |
| dbp:curation |
Yes - manual and automatic. Rules for automatic annotation generated by Database Curators and computational algorithms. (en) |
| dbp:description |
TopFIND is the Termini oriented protein Function Inferred Database, a central resource of protein data integrated with knowledge on protein termini, proteolytic processing by proteases, terminal amino acid modifications and inferred functional implications created by combining community contributions with the UniProt and MEROPS databases. (en) |
| dbp:format |
Custom comma separated file, SQL, XML. (en) |
| dbp:laboratory |
Christopher Overall (en) |
| dbp:license |
Creative Commons Attribution-NoDerivs (en) |
| dbp:organism |
H. sapiens, M. musculus, A. thaliana, S. cerevisiae, E. coli (en) |
| dbp:released |
2011 (xsd:integer) |
| dbp:scope |
Protein annotation (en) |
| dbp:title |
TopFIND (en) |
| dbp:wikiPageUsesTemplate |
dbt:Infobox_biodatabase dbt:Enzymes dbt:Genomics-footer dbt:MeshName dbt:Reflist dbt:Short_description dbt:URL dbt:Proteases |
| dc:description |
TopFIND is the Termini oriented protein Function Inferred Database, a central resource ofproteindata integrated with knowledge onproteintermini, proteolytic processing byproteases, terminal amino acid modifications and inferred functional implications created by combining community contributions with theUniProtandMEROPSdatabases. |
| dcterms:subject |
dbc:Bioinformatics_software dbc:Post-translational_modification dbc:Protein_families dbc:Biological_databases dbc:Molecular_biology dbc:Protein_domains dbc:Mathematical_and_theoretical_biology dbc:Systems_biology |
| gold:hypernym |
dbr:Termini |
| rdf:type |
owl:Thing schema:CreativeWork dbo:Work wikidata:Q386724 dbo:Database dul:InformationObject dbo:BiologicalDatabase yago:Abstraction100002137 yago:Family108078020 yago:Group100031264 yago:Organization108008335 yago:YagoLegalActor yago:YagoLegalActorGeo yago:YagoPermanentlyLocatedEntity dbo:Station yago:SocialGroup107950920 yago:Unit108189659 yago:WikicatProteinFamilies |
| rdfs:comment |
TopFIND is the Termini oriented protein Function Inferred Database (TopFIND) is an integrated knowledgebase focused on protein termini, their formation by proteases and functional implications. It contains information about the processing and the processing state of proteins and functional implications thereof derived from research literature, contributions by the scientific community and biological databases. (en) |
| rdfs:label |
TopFIND (en) |
| owl:sameAs |
freebase:TopFIND yago-res:TopFIND wikidata:TopFIND https://global.dbpedia.org/id/4wC8o |
| prov:wasDerivedFrom |
wikipedia-en:TopFIND?oldid=995654856&ns=0 |
| foaf:isPrimaryTopicOf |
wikipedia-en:TopFIND |
| is dbo:wikiPageWikiLink of |
dbr:MEROPS dbr:Threonine_protease dbr:Cysteine_protease dbr:Protease dbr:C-terminus dbr:N-terminus dbr:Serine_protease |
| is foaf:primaryTopic of |
wikipedia-en:TopFIND |