preprocessCore (original) (raw)
This is the released version of preprocessCore; for the devel version, seepreprocessCore.
A collection of pre-processing functions
Bioconductor version: Release (3.21)
A library of core preprocessing routines.
Author: Ben Bolstad
Maintainer: Ben Bolstad
Citation (from within R, enter citation("preprocessCore")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("preprocessCore")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
Details
| biocViews | Infrastructure, Software |
|---|---|
| Version | 1.70.0 |
| In Bioconductor since | BioC 2.1 (R-2.6) (17.5 years) |
| License | LGPL (>= 2) |
| Depends | |
| Imports | stats |
| System Requirements | |
| URL | https://github.com/bmbolstad/preprocessCore |
See More
| Suggests | |
|---|---|
| Linking To | |
| Enhances | |
| Depends On Me | affyPLM, crlmm |
| Imports Me | affy, BloodGen3Module, bnbc, cn.farms, CPSM, crupR, cypress, EMDomics, ExiMiR, fastLiquidAssociation, frma, frmaTools, hipathia, iCheck, InPAS, lumi, MADSEQ, MBCB, MBQN, MEDIPS, methylclock, mimager, minfi, MSPrep, MSstats, NormalyzerDE, oligo, PanomiR, PECA, PhosR, Pigengene, PRONE, qPLEXanalyzer, quantiseqr, sesame, soGGi, tidybulk, yarn, GSE13015, ADAPTS, bulkAnalyseR, cinaR, FARDEEP, HEMDAG, lilikoi, noise, noisyr, oncoPredict, retriever, SMDIC, WGCNA |
| Suggests Me | DAPAR, MsCoreUtils, multiClust, QFeatures, roastgsa, scp, splatter, tidytof, wateRmelon, aroma.affymetrix, aroma.core, SCdeconR, wrMisc, wrTopDownFrag |
| Links To Me | affy, affyPLM, crlmm, oligo |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | preprocessCore_1.70.0.tar.gz |
|---|---|
| Windows Binary (x86_64) | preprocessCore_1.70.0.zip |
| macOS Binary (x86_64) | preprocessCore_1.70.0.tgz |
| macOS Binary (arm64) | preprocessCore_1.70.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/preprocessCore |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/preprocessCore |
| Bioc Package Browser | https://code.bioconductor.org/browse/preprocessCore/ |
| Package Short Url | https://bioconductor.org/packages/preprocessCore/ |
| Package Downloads Report | Download Stats |