Post-translational modifications regulate microtubule function (original) (raw)
Luduena, R. F. Multiple forms of tubulin: different gene products and covalent modifications. Int. Rev. Cytol.178, 207–275 (1998). ArticleCASPubMed Google Scholar
MacRae, T. H. Tubulin post-translational modifications — enzymes and their mechanisms of action. Eur. J. Biochem.244, 265–278 (1997). ArticleCASPubMed Google Scholar
Nogales, E., Whittaker, M., Milligan, R. A. & Downing, K. H. High-resolution model of the microtubule. Cell96, 79–88 (1999). ArticleCASPubMed Google Scholar
Nogales, E., Wolf, S. G. & Downing, K. H. Structure of the αβ tubulin dimer by electron crystallography. Nature391, 199–203 (1998). ArticleCASPubMed Google Scholar
Sullivan, K. F. & Cleveland, D. W. Identification of conserved isotype-defining variable region sequences for four vertebrate β tubulin polypeptide classes. Proc. Natl Acad. Sci. USA83, 4327–4331 (1986). ArticleCASPubMedPubMed Central Google Scholar
Mejillano, M. R. & Himes, R. H. Assembly properties of tubulin after carboxyl group modification. J. Biol. Chem.266, 657–664 (1991). ArticleCASPubMed Google Scholar
Mejillano, M. R., Tolo, E. T., Williams, R. C. Jr. & Himes, R. H. The conversion of tubulin carboxyl groups to amides has a stabilizing effect on microtubules. Biochemistry31, 3478–3483 (1992). ArticleCASPubMed Google Scholar
Fackenthal, J. D., Turner, F. R. & Raff, E. C. Tissue-specific microtubule functions in Drosophila spermatogenesis require the β2-tubulin isotype-specific carboxy terminus. Dev. Biol.158, 213–227 (1993). ArticleCASPubMed Google Scholar
Duan, J. & Gorovsky, M. A. Both carboxy-terminal tails of α- and β-tubulin are essential, but either one will suffice. Curr. Biol.12, 313–316 (2002). Elegant genetic experiments identify essential functions for the tubulin carboxy-terminal tails inTetrahymena. ArticleCASPubMed Google Scholar
Strahl, B. D. & Allis, C. D. The language of covalent histone modifications. Nature403, 41–45 (2000). ArticleCASPubMed Google Scholar
L'Hernault, S. W. & Rosenbaum, J. L. Chlamydomonas α-tubulin is posttranslationally modified by acetylation on the ε-amino group of a lysine. Biochemistry24, 473–478 (1985). ArticleCASPubMed Google Scholar
LeDizet, M. & Piperno, G. Identification of an acetylation site of Chlamydomonas α-tubulin. Proc. Natl Acad. Sci. USA84, 5720–5724 (1987). ArticleCASPubMedPubMed Central Google Scholar
Sasse, R. & Gull, K. Tubulin post-translational modifications and the construction of microtubular organelles in Trypanosoma brucei. J. Cell Sci.90, 577–589 (1988). ArticleCASPubMed Google Scholar
Weber, K., Schneider, A., Westermann, S., Muller, N. & Plessmann, U. Posttranslational modifications of α- and β-tubulin in Giardia lamblia, an ancient eukaryote. FEBS Lett.419, 87–91 (1997). ArticleCASPubMed Google Scholar
Schneider, A., Plessmann, U., Felleisen, R. & Weber, K. Posttranslational modifications of trichomonad tubulins; identification of multiple glutamylation sites. FEBS Lett.429, 399–402 (1998). ArticleCASPubMed Google Scholar
Schneider, A., Plessmann, U. & Weber, K. Subpellicular and flagellar microtubules of Trypanosoma brucei are extensively glutamylated. J. Cell Sci.110, 431–437 (1997). ArticleCASPubMed Google Scholar
Maruta, H., Greer, K. & Rosenbaum, J. L. The acetylation of α-tubulin and its relationship to the assembly and disassembly of microtubules. J. Cell Biol.103, 571–579 (1986). ArticleCASPubMed Google Scholar
Hubbert, C. et al. HDAC6 is a microtubule-associated deacetylase. Nature417, 455–458 (2002). ArticleCASPubMed Google Scholar
North, B. J., Marshall, B. L., Borra, M. T., Denu, J. M. & Verdin, E. The human Sir2 ortholog, SIRT2, is an NAD+-dependent tubulin deacetylase. Mol. Cell11, 437–444 (2003). References 19–22 identify HDAC6 and SIRT2 as tubulin deacetylases and propose a role for tubulin acetylation in cell motility. ArticleCASPubMed Google Scholar
Kozminski, K. G., Diener, D. R. & Rosenbaum, J. L. High level expression of nonacetylatable α-tubulin in Chlamydomonas reinhardtii. Cell Motil. Cytoskeleton25, 158–170 (1993). ArticleCASPubMed Google Scholar
Gaertig, J. et al. Acetylation of lysine 40 in α-tubulin is not essential in Tetrahymena thermophila. J. Cell Biol.129, 1301–1310 (1995). ArticleCASPubMed Google Scholar
Haggarty, S. J., Koeller, K. M., Wong, J. C., Grozinger, C. M. & Schreiber, S. L. Domain-selective small-molecule inhibitor of histone deacetylase 6 (HDAC6)-mediated tubulin deacetylation. Proc. Natl Acad. Sci. USA100, 4389–4394 (2003). ArticleCASPubMedPubMed Central Google Scholar
Palazzo, A., Ackerman, B. & Gundersen, G. G. Cell biology: tubulin acetylation and cell motility. Nature421, 230 (2003). ArticleCASPubMed Google Scholar
Redeker, V. et al. Polyglycylation of tubulin: a posttranslational modification in axonemal microtubules. Science266, 1688–1691 (1994). ArticleCASPubMed Google Scholar
Rudiger, M., Plessmann, U., Rudiger, A. H. & Weber, K. β tubulin of bull sperm is polyglycylated. FEBS Lett.364, 147–151 (1995). ArticleCASPubMed Google Scholar
Plessmann, U. & Weber, K. Mammalian sperm tubulin: an exceptionally large number of variants based on several posttranslational modifications. J. Protein Chem.16, 385–390 (1997). ArticleCASPubMed Google Scholar
Mary, J., Redeker, V., Le Caer, J. P., Rossier, J. & Schmitter, J. M. Posttranslational modifications of axonemal tubulin. J. Protein Chem.16, 403–407 (1997). ArticleCASPubMed Google Scholar
Bre, M. H., Redeker, V., Vinh, J., Rossier, J. & Levilliers, N. Tubulin polyglycylation: differential posttranslational modification of dynamic cytoplasmic and stable axonemal microtubules in paramecium. Mol. Biol. Cell9, 2655–2665 (1998). ArticleCASPubMedPubMed Central Google Scholar
Weber, K., Schneider, A., Muller, N. & Plessmann, U. Polyglycylation of tubulin in the diplomonad Giardia lamblia, one of the oldest eukaryotes. FEBS Lett.393, 27–30 (1996). ArticleCASPubMed Google Scholar
Xia, L. et al. Polyglycylation of tubulin is essential and affects cell motility and division in Tetrahymena thermophila. J. Cell Biol.149, 1097–1106 (2000). ArticleCASPubMedPubMed Central Google Scholar
Thazhath, R., Liu, C. & Gaertig, J. Polyglycylation domain of β-tubulin maintains axonemal architecture and affects cytokinesis in Tetrahymena. Nature Cell Biol.4, 256–259 (2002). References 33 and 34 provide a careful analysis of tubulin polyglycylation inTetrahymenaand identify its essential functions in cell motility and cytokinesis. ArticleCASPubMed Google Scholar
Mary, J., Redeker, V., Le Caer, J. P., Prome, J. C. & Rossier, J. Class I and IVa β-tubulin isotypes expressed in adult mouse brain are glutamylated. FEBS Lett.353, 89–94 (1994). ArticleCASPubMed Google Scholar
Rudiger, M., Plessman, U., Kloppel, K. D., Wehland, J. & Weber, K. Class II tubulin, the major brain β tubulin isotype is polyglutamylated on glutamic acid residue 435. FEBS Lett.308, 101–105 (1992). ArticleCASPubMed Google Scholar
Alexander, J. et al. Characterization of posttranslational modifications in neuron-specific class III β-tubulin by mass spectrometry. Proc. Natl Acad. Sci. USA88, 4685–4689 (1991). ArticleCASPubMedPubMed Central Google Scholar
Redeker, V., Rossier, J. & Frankfurter, A. Posttranslational modifications of the C-terminus of α-tubulin in adult rat brain: α4 is glutamylated at two residues. Biochemistry37, 14838–14844 (1998). ArticleCASPubMed Google Scholar
Bre, M. H., de Nechaud, B., Wolff, A. & Fleury, A. Glutamylated tubulin probed in ciliates with the monoclonal antibody GT335. Cell Motil. Cytoskeleton27, 337–349 (1994). ArticleCASPubMed Google Scholar
Lechtreck, K. F. & Geimer, S. Distribution of polyglutamylated tubulin in the flagellar apparatus of green flagellates. Cell Motil. Cytoskeleton47, 219–235 (2000). ArticleCASPubMed Google Scholar
Bobinnec, Y. et al. Glutamylation of centriole and cytoplasmic tubulin in proliferating non-neuronal cells. Cell Motil. Cytoskeleton39, 223–232 (1998). ArticleCASPubMed Google Scholar
Regnard, C. et al. Polyglutamylation of nucleosome assembly proteins. J. Biol. Chem.275, 15969–15976 (2000). Identifies the nucleosome assembly proteins NAP1 and NAP2 as substrates for polyglutamylation, indicating that this is a more general protein modification. ArticleCASPubMed Google Scholar
Regnard, C., Audebert, S., Desbruyeres Denoulet, P. & Edde, B. Tubulin polyglutamylase: partial purification and enzymatic properties. Biochemistry37, 8395–8404 (1998). ArticleCASPubMed Google Scholar
Regnard, C. et al. Characterisation of PGs1, a subunit of a protein complex co-purifying with tubulin polyglutamylase. J. Cell Sci.116, 4181–4190 (2003). ArticleCASPubMed Google Scholar
Regnard, C., Desbruyeres, E., Denoulet, P. & Edde, B. Tubulin polyglutamylase: isozymic variants and regulation during the cell cycle in HeLa cells. J. Cell Sci.112, 4281–4289 (1999). ArticleCASPubMed Google Scholar
Westermann, S., Schneider, A., Horn, E. K. & Weber, K. Isolation of tubulin polyglutamylase from Crithidia; binding to microtubules and tubulin, and glutamylation of mammalian brain α- and β-tubulins. J. Cell Sci.112, 2185–2193 (1999). ArticleCASPubMed Google Scholar
Westermann, S., Plessmann, U. & Weber, K. Synthetic peptides identify the minimal substrate requirements of tubulin polyglutamylase in side chain elongation. FEBS Lett.459, 90–94 (1999). ArticleCASPubMed Google Scholar
Westermann, S. & Weber, K. Identification of CfNek, a novel member of the NIMA family of cell cycle regulators, as a polypeptide copurifying with tubulin polyglutamylation activity in Crithidia. J. Cell Sci.115, 5003–5012 (2002). Identifies a kinase of the NIMA family as the first enzyme involved in tubulin polyglutamylation. ArticleCASPubMed Google Scholar
Liu, S. et al. A defect in a novel Nek-family kinase causes cystic kidney disease in the mouse and in zebrafish. Development129, 5839–5846 (2002). ArticleCASPubMed Google Scholar
Pazour, G. J. & Rosenbaum, J. L. Intraflagellar transport and cilia-dependent diseases. Trends Cell Biol.12, 551–555 (2002). ArticleCASPubMed Google Scholar
Manning, G., Whyte, D. B., Martinez, R., Hunter, T. & Sudarsanam, S. The protein kinase complement of the human genome. Science298, 1912–1934 (2002). ArticleCASPubMed Google Scholar
Upadhya, P., Birkenmeier, E. H., Birkenmeier, C. S. & Barker, J. E. Mutations in a NIMA-related kinase gene, Nek1, cause pleiotropic effects including a progressive polycystic kidney disease in mice. Proc. Natl Acad. Sci. USA97, 217–221 (2000). ArticleCASPubMedPubMed Central Google Scholar
Audebert, S. et al. Reversible polyglutamylation of α- and β-tubulin and microtubule dynamics in mouse brain neurons. Mol. Biol. Cell4, 615–626 (1993). ArticleCASPubMedPubMed Central Google Scholar
Larcher, J. C., Boucher, D., Lazereg, S., Gros, F. & Denoulet, P. Interaction of kinesin motor domains with α- and β-tubulin subunits at a tau-independent binding site. Regulation by polyglutamylation. J. Biol. Chem.271, 22117–22124 (1996). ArticleCASPubMed Google Scholar
Bonnet, C. et al. Differential binding regulation of microtubule-associated proteins MAP1A, MAP1B, and MAP2 by tubulin polyglutamylation. J. Biol. Chem.276, 12839–12848 (2001). ArticleCASPubMed Google Scholar
Okada, Y. & Hirokawa, N. Mechanism of the single-headed processivity: diffusional anchoring between the K-loop of kinesin and the C terminus of tubulin. Proc. Natl Acad. Sci. USA97, 640–645 (2000). ArticleCASPubMedPubMed Central Google Scholar
Thorn, K. S., Ubersax, J. A. & Vale, R. D. Engineering the processive run length of the kinesin motor. J. Cell Biol.151, 1093–1100 (2000). ArticleCASPubMedPubMed Central Google Scholar
Gagnon, C. et al. The polyglutamylated lateral chain of α-tubulin plays a key role in flagellar motility. J. Cell Sci.109, 1545–1553 (1996). ArticleCASPubMed Google Scholar
Million, K. et al. Polyglutamylation and polyglycylation of α- and β-tubulins during in vitro ciliated cell differentiation of human respiratory epithelial cells. J. Cell Sci.112, 4357–4366 (1999). ArticleCASPubMed Google Scholar
Bobinnec, Y. et al. Centriole disassembly in vivo and its effect on centrosome structure and function in vertebrate cells. J. Cell Biol.143, 1575–1589 (1998). Antibody-microinjection studies identify tubulin polyglutamylation as being essential for centriole stability and centrosome structure. ArticleCASPubMedPubMed Central Google Scholar
Bornens, M. Centrosome composition and microtubule anchoring mechanisms. Curr. Opin. Cell Biol.14, 25–34 (2002). ArticleCASPubMed Google Scholar
Argarana, C. E., Barra, H. S. & Caputto, R. Release of [14C]tyrosine from tubulinyl-[14C]tyrosine by brain extract. Separation of a carboxypeptidase from tubulin-tyrosine ligase. Mol. Cell. Biochem.19, 17–21 (1978). ArticleCASPubMed Google Scholar
Barra, H. S., Rodriguez, J. A., Arce, C. A. & Caputto, R. A soluble preparation from rat brain that incorporates into its own proteins (14C)arginine by a ribonuclease-sensitive system and (14C)tyrosine by a ribonuclease-insensitive system. J. Neurochem.20, 97–108 (1973). ArticleCASPubMed Google Scholar
Arce, C. A., Rodriguez, J. A., Barra, H. S. & Caputo, R. Incorporation of L-tyrosine, L-phenylalanine and L-3,4-dihydroxyphenylalanine as single units into rat brain tubulin. Eur. J. Biochem.59, 145–149 (1975). ArticleCASPubMed Google Scholar
Argarana, C. E., Arce, C. A., Barra, H. S. & Caputto, R. In vivo incorporation of [14C]tyrosine into the C-terminal position of the α subunit of tubulin. Arch. Biochem. Biophys.180, 264–268 (1977). ArticleCASPubMed Google Scholar
Paturle-Lafanechere, L. et al. Characterization of a major brain tubulin variant which cannot be tyrosinated. Biochemistry30, 10523–10528 (1991). ArticleCASPubMed Google Scholar
Rudiger, M., Wehland, J. & Weber, K. The carboxy-terminal peptide of detyrosinated α tubulin provides a minimal system to study the substrate specificity of tubulin-tyrosine ligase. Eur. J. Biochem.220, 309–320 (1994). ArticleCASPubMed Google Scholar
Banerjee, A. Coordination of posttranslational modifications of bovine brain α-tubulin. Polyglycylation of δ2 tubulin. J. Biol. Chem.277, 46140–46144 (2002). ArticleCASPubMed Google Scholar
Multigner, L. et al. The A and B tubules of the outer doublets of sea urchin sperm axonemes are composed of different tubulin variants. Biochemistry35, 10862–10871 (1996). ArticleCASPubMed Google Scholar
Johnson, K. A. The axonemal microtubules of the Chlamydomonas flagellum differ in tubulin isoform content. J. Cell Sci.111, 313–320 (1998). ArticleCASPubMed Google Scholar
Bre, M. H. et al. Axonemal tubulin polyglycylation probed with two monoclonal antibodies: widespread evolutionary distribution, appearance during spermatozoan maturation and possible function in motility. J. Cell Sci.109, 727–738 (1996). ArticleCASPubMed Google Scholar
Huitorel, P. et al. Differential distribution of glutamylated tubulin isoforms along the sea urchin sperm axoneme. Mol. Reprod. Dev.62, 139–148 (2002). ArticleCASPubMed Google Scholar
Murofushi, H. Purification and characterization of tubulin-tyrosine ligase from porcine brain. J. Biochem.87, 979–984 (1980). ArticleCASPubMed Google Scholar
Ersfeld, K. et al. Characterization of the tubulin-tyrosine ligase. J. Cell Biol.120, 725–732 (1993). ArticleCASPubMed Google Scholar
Galperin, M. Y. & Koonin, E. V. A diverse superfamily of enzymes with ATP-dependent carboxylate-amine/thiol ligase activity. Protein Sci.6, 2639–2643 (1997). ArticleCASPubMedPubMed Central Google Scholar
Argarana, C. E., Barra, H. S. & Caputto, R. Tubulinyl-tyrosine carboxypeptidase from chicken brain: properties and partial purification. J. Neurochem.34, 114–118 (1980). ArticleCASPubMed Google Scholar
Wehland, J. & Weber, K. Turnover of the carboxy-terminal tyrosine of α-tubulin and means of reaching elevated levels of detyrosination in living cells. J. Cell Sci.88, 185–203 (1987). ArticleCASPubMed Google Scholar
Webster, D. R., Gundersen, G. G., Bulinski, J. C. & Borisy, G. G. Assembly and turnover of detyrosinated tubulin in vivo. J. Cell Biol.105, 265–276 (1987). ArticleCASPubMed Google Scholar
Webster, D. R., Wehland, J., Weber, K. & Borisy, G. G. Detyrosination of α tubulin does not stabilize microtubules in vivo. J. Cell Biol.111, 113–122 (1990). ArticleCASPubMed Google Scholar
Cook, T. A., Nagasaki, T. & Gundersen, G. G. Rho guanosine triphosphatase mediates the selective stabilization of microtubules induced by lysophosphatidic acid. J. Cell Biol.141, 175–185 (1998). ArticleCASPubMedPubMed Central Google Scholar
Palazzo, A. F., Cook, T. A., Alberts, A. S. & Gundersen, G. G. mDia mediates Rho-regulated formation and orientation of stable microtubules. Nature Cell Biol.3, 723–729 (2001). ArticleCASPubMed Google Scholar
Infante, A. S., Stein, M. S., Zhai, Y., Borisy, G. G. & Gundersen, G. G. Detyrosinated (Glu) microtubules are stabilized by an ATP-sensitive plus-end cap. J. Cell Sci.113, 3907–3919 (2000). ArticleCASPubMed Google Scholar
Gurland, G. & Gundersen, G. G. Stable, detyrosinated microtubules function to localize vimentin intermediate filaments in fibroblasts. J. Cell Biol.131, 1275–1290 (1995). ArticleCASPubMed Google Scholar
Liao, G. & Gundersen, G. G. Kinesin is a candidate for cross-bridging microtubules and intermediate filaments. Selective binding of kinesin to detyrosinated tubulin and vimentin. J. Biol. Chem.273, 9797–9803 (1998). ArticleCASPubMed Google Scholar
Kreitzer, G., Liao, G. & Gundersen, G. G. Detyrosination of tubulin regulates the interaction of intermediate filaments with microtubules in vivo via a kinesin-dependent mechanism. Mol. Biol. Cell10, 1105–1118 (1999). ArticleCASPubMedPubMed Central Google Scholar
Lafanechere, L. et al. Suppression of tubulin tyrosine ligase during tumor growth. J. Cell Sci.111, 171–181 (1998). ArticleCASPubMed Google Scholar
Mialhe, A. et al. Tubulin detyrosination is a frequent occurrence in breast cancers of poor prognosis. Cancer Res.61, 5024–5027 (2001). CASPubMed Google Scholar
Eiserich, J. P. et al. Microtubule dysfunction by posttranslational nitrotyrosination of α-tubulin: a nitric oxide-dependent mechanism of cellular injury. Proc. Natl Acad. Sci. USA96, 6365–6370 (1999). ArticleCASPubMedPubMed Central Google Scholar
Kalisz, H. M., Erck, C., Plessmann, U. & Wehland, J. Incorporation of nitrotyrosine into α-tubulin by recombinant mammalian tubulin-tyrosine ligase. Biochim. Biophys. Acta1481, 131–138 (2000). ArticleCASPubMed Google Scholar
Chang, W. et al. Alteration of the C-terminal amino acid of tubulin specifically inhibits myogenic differentiation. J. Biol. Chem.277, 30690–30698 (2002). ArticleCASPubMed Google Scholar
Gard, D. L. & Kirschner, M. W. A polymer-dependent increase in phosphorylation of β-tubulin accompanies differentiation of a mouse neuroblastoma cell line. J. Cell Biol.100, 764–774 (1985). ArticleCASPubMed Google Scholar
Caron, J. M. Posttranslational modification of tubulin by palmitoylation: I. In vivo and cell-free studies. Mol. Biol. Cell8, 621–636 (1997). ArticleCASPubMedPubMed Central Google Scholar
Ozols, J. & Caron, J. M. Posttranslational modification of tubulin by palmitoylation: II. Identification of sites of palmitoylation. Mol. Biol. Cell8, 637–645 (1997). ArticleCASPubMedPubMed Central Google Scholar
Caron, J. M., Vega, L. R., Fleming, J., Bishop, R. & Solomon, F. Single site α-tubulin mutation affects astral microtubules and nuclear positioning during anaphase in Saccharomyces cerevisiae: possible role for palmitoylation of α-tubulin. Mol. Biol. Cell12, 2672–2687 (2001). ArticleCASPubMedPubMed Central Google Scholar
Sisson, J. C., Ho, K. S., Suyama, K. & Scott, M. P. Costal2, a novel kinesin-related protein in the Hedgehog signaling pathway. Cell90, 235–245 (1997). ArticleCASPubMed Google Scholar
Nogales, E., Downing, K. H., Amos, L. A. & Lowe, J. Tubulin and FtsZ form a distinct family of GTPases. Nature Struct. Biol.5, 451–458 (1998). ArticleCASPubMed Google Scholar
McKean, P. G., Vaughan, S. & Gull, K. The extended tubulin superfamily. J. Cell Sci.114, 2723–2733 (2001). ArticleCASPubMed Google Scholar
Dupuis-Williams, P. et al. Functional role of ε-tubulin in the assembly of the centriolar microtubule scaffold. J. Cell Biol.158, 1183–1193 (2002). ArticleCASPubMedPubMed Central Google Scholar
Vinh, J. et al. Structural characterization by tandem mass spectrometry of the posttranslational polyglycylation of tubulin. Biochemistry38, 3133–3139 (1999). ArticleCASPubMed Google Scholar
Vinh, J., Loyaux, D., Redeker, V. & Rossier, J. Sequencing branched peptides with CID/PSD MALDI-TOF in the low–picomole range: application to the structural study of the posttranslational polyglycylation of tubulin. Anal. Chem.69, 3979–3985 (1997). ArticleCASPubMed Google Scholar