Transgenerational epigenetic inheritance of longevity in Caenorhabditis elegans (original) (raw)
Cubas, P., Vincent, C. & Coen, E. An epigenetic mutation responsible for natural variation in floral symmetry. Nature401, 157–161 (1999) ArticleCASADS Google Scholar
Brink, R. A. A genetic change associated with the R locus in maize which is directed and potentially reversible. Genetics41, 872–889 (1956) CASPubMedPubMed Central Google Scholar
Woodhouse, M. R., Freeling, M. & Lisch, D. Initiation, establishment, and maintenance of heritable MuDR transposon silencing in maize are mediated by distinct factors. PLoS Biol.4, e339 (2006) Article Google Scholar
Katz, D. J., Edwards, T. M., Reinke, V. & Kelly, W. G. A C.elegans LSD1 demethylase contributes to germline immortality by reprogramming epigenetic memory. Cell137, 308–320 (2009) ArticleCAS Google Scholar
Cavalli, G. & Paro, R. The DrosophilaFab-7 chromosomal element conveys epigenetic inheritance during mitosis and meiosis. Cell93, 505–518 (1998) ArticleCAS Google Scholar
Cavalli, G. & Paro, R. Epigenetic inheritance of active chromatin after removal of the main transactivator. Science286, 955–958 (1999) ArticleCAS Google Scholar
Seong, K. H., Li, D., Shimizu, H., Nakamura, R. & Ishii, S. Inheritance of stress-induced, ATF-2-dependent epigenetic change. Cell145, 1049–1061 (2011) ArticleCAS Google Scholar
Morgan, H. D., Sutherland, H. G., Martin, D. I. & Whitelaw, E. Epigenetic inheritance at the agouti locus in the mouse. Nature Genet.23, 314–318 (1999) ArticleCAS Google Scholar
Blewitt, M. E., Vickaryous, N. K., Paldi, A., Koseki, H. & Whitelaw, E. Dynamic reprogramming of DNA methylation at an epigenetically sensitive allele in mice. PLoS Genet.2, e49 (2006) ArticleCAS Google Scholar
Rassoulzadegan, M. et al. RNA-mediated non-mendelian inheritance of an epigenetic change in the mouse. Nature441, 469–474 (2006) ArticleCASADS Google Scholar
Dang, W. et al. Histone H4 lysine 16 acetylation regulates cellular lifespan. Nature459, 802–807 (2009) ArticleCASADS Google Scholar
Greer, E. L. et al. Members of the H3K4 trimethylation complex regulate lifespan in a germline-dependent manner in C. elegans . Nature466, 383–387 (2010) ArticleCASADS Google Scholar
Siebold, A. P. et al. Polycomb Repressive Complex 2 and Trithorax modulate Drosophila longevity and stress resistance. Proc. Natl Acad. Sci. USA107, 169–174 (2010) ArticleCASADS Google Scholar
McColl, G. et al. Pharmacogenetic analysis of lithium-induced delayed aging in Caenorhabditis elegans . J. Biol. Chem.283, 350–357 (2008) ArticleCAS Google Scholar
Chen, S. et al. The conserved NAD(H)-dependent corepressor CTBP-1 regulates Caenorhabditis elegans life span. Proc. Natl Acad. Sci. USA106, 1496–1501 (2009) ArticleCASADS Google Scholar
Takahashi, Y. et al. Asymmetric arginine dimethylation determines life span in C.elegans by regulating forkhead transcription factor DAF-16. Cell Metab.13, 505–516 (2011) ArticleCAS Google Scholar
Maures, T. J., Greer, E. L., Hauswirth, A. G. & Brunet, A. The H3K27 demethylase UTX-1 regulates C.elegans lifespan in a germline-independent, insulin-dependent manner. Aging Cell 10.1111/j.1474-9726.2011.00738.x (11 August 2011)
Jin, C. et al. Histone demethylase UTX-1 regulates C.elegans life span by targeting the insulin/IGF-1 signaling pathway. Cell Metab.14, 161–172 (2011) ArticleCAS Google Scholar
Steward, M. M. et al. Molecular regulation of H3K4 trimethylation by ASH2L, a shared subunit of MLL complexes. Nature Struct. Mol. Biol.13, 852–854 (2006) ArticleCAS Google Scholar
Simonet, T., Dulermo, R., Schott, S. & Palladino, F. Antagonistic functions of SET-2/SET1 and HPL/HP1 proteins in C.elegans development. Dev. Biol.312, 367–383 (2007) ArticleCAS Google Scholar
Xiao, Y. et al. Caenorhabditis elegans chromatin-associated proteins SET-2 and ASH-2 are differentially required for histone H3 Lys 4 methylation in embryos and adult germ cells. Proc. Natl Acad. Sci. USA108, 8305–8310 (2011) ArticleCASADS Google Scholar
Li, T. & Kelly, W. G. A role for Set1/MLL-related components in epigenetic regulation of the Caenorhabditis elegans germ line. PLoS Genet.7, e1001349 (2011) ArticleCAS Google Scholar
Dou, Y. et al. Regulation of MLL1 H3K4 methyltransferase activity by its core components. Nature Struct. Mol. Biol.13, 713–719 (2006) ArticleCAS Google Scholar
Haag, E. S., Wang, S. & Kimble, J. Rapid coevolution of the nematode sex-determining genes fem-3 and tra-2 . Curr. Biol.12, 2035–2041 (2002) ArticleCAS Google Scholar
Kawasaki, I. et al. PGL-1, a predicted RNA-binding component of germ granules, is essential for fertility in C. elegans . Cell94, 635–645 (1998) ArticleCAS Google Scholar
Fisher, K., Southall, S. M., Wilson, J. R. & Poulin, G. B. Methylation and demethylation activities of a C. elegans MLL-like complex attenuate RAS signalling. Dev. Biol.341, 142–153 (2010) ArticleCAS Google Scholar
Curran, S. P. & Ruvkun, G. Lifespan regulation by evolutionarily conserved genes essential for viability. PLoS Genet.3, e56 (2007) Article Google Scholar
Hamilton, B. et al. A systematic RNAi screen for longevity genes in C. elegans . Genes Dev.19, 1544–1555 (2005) ArticleCAS Google Scholar
Kim, Y. & Sun, H. Functional genomic approach to identify novel genes involved in the regulation of oxidative stress resistance and animal lifespan. Aging Cell6, 489–503 (2007) ArticleCAS Google Scholar
Lee, S. S. et al. A systematic RNAi screen identifies a critical role for mitochondria in C. elegans longevity. Nature Genet.33, 40–48 (2003) ArticleCAS Google Scholar
Dillin, A. et al. Rates of behavior and aging specified by mitochondrial function during development. Science298, 2398–2401 (2002) ArticleCASADS Google Scholar
Murphy, C. T. et al. Genes that act downstream of DAF-16 to influence the lifespan of Caenorhabditis elegans . Nature424, 277–283 (2003) ArticleCASADS Google Scholar
Kenyon, C., Chang, J., Gensch, E., Rudner, A. & Tabtiang, R. A C. elegans mutant that lives twice as long as wild type. Nature366, 461–464 (1993) ArticleCASADS Google Scholar
Liu, T. et al. Broad chromosomal domains of histone modification patterns in C. elegans . Genome Res.21, 227–236 (2011) ArticleCAS Google Scholar
Gerstein, M. B. et al. Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project. Science330, 1775–1787 (2010) ArticleCASADS Google Scholar
Spencer, W. C. et al. A spatial and temporal map of C. elegans gene expression. Genome Res.21, 325–341 (2011) ArticleCAS Google Scholar
Wu, S. C. & Zhang, Y. Active DNA demethylation: many roads lead to Rome. Nature Rev. Mol. Cell Biol.11, 607–620 (2010) ArticleCAS Google Scholar
Martin, C. & Zhang, Y. Mechanisms of epigenetic inheritance. Curr. Opin. Cell Biol.19, 266–272 (2007) ArticleCAS Google Scholar
Muramoto, T., Muller, I., Thomas, G., Melvin, A. & Chubb, J. R. Methylation of H3K4 Is required for inheritance of active transcriptional states. Curr. Biol.20, 397–406 (2010) ArticleCAS Google Scholar
Greer, E. L. et al. An AMPK-FOXO pathway mediates longevity induced by a novel method of dietary restriction in C. elegans . Curr. Biol.17, 1646–1656 (2007) ArticleCAS Google Scholar
Pferdehirt, R. R., Kruesi, W. S. & Meyer, B. J. An MLL/COMPASS subunit functions in the C. elegans dosage compensation complex to target X chromosomes for transcriptional regulation of gene expression. Genes Dev.25, 499–515 (2011) ArticleCAS Google Scholar
Tusher, V. G., Tibshirani, R. & Chu, G. Significance analysis of microarrays applied to the ionizing radiation response. Proc. Natl Acad. Sci. USA98, 5116–5121 (2001) ArticleCASADS Google Scholar
Suzuki, R. & Shimodaira, H. Pvclust: an R package for assessing the uncertainty in hierarchical clustering. Bioinformatics22, 1540–1542 (2006) ArticleCAS Google Scholar
Pearson, K. On lines and planes of closest fit to systems of points in space. Phil. Mag.6, 559–572 (1901) Article Google Scholar
Buck, M. J., Nobel, A. B. & Lieb, J. D. ChIPOTle: a user-friendly tool for the analysis of ChIP-chip data. Genome Biol.6, R97 (2005) Article Google Scholar