Recessive mutations in EPG5 cause Vici syndrome, a multisystem disorder with defective autophagy (original) (raw)

Accession codes

Accessions

NCBI Reference Sequence

References

  1. Vici, C.D. et al. Agenesis of the corpus callosum, combined immunodeficiency, bilateral cataract, and hypopigmentation in two brothers. Am. J. Med. Genet. 29, 1–8 (1988).
    Article Google Scholar
  2. del Campo, M. et al. Albinism and agenesis of the corpus callosum with profound developmental delay: Vici syndrome, evidence for autosomal recessive inheritance. Am. J. Med. Genet. 85, 479–485 (1999).
    Article CAS PubMed Google Scholar
  3. Chiyonobu, T. et al. Sister and brother with Vici syndrome: agenesis of the corpus callosum, albinism, and recurrent infections. Am. J. Med. Genet. 109, 61–66 (2002).
    Article PubMed Google Scholar
  4. Miyata, R. et al. Sibling cases of Vici syndrome: sleep abnormalities and complications of renal tubular acidosis. Am. J. Med. Genet. A. 143, 189–194 (2007).
    Article Google Scholar
  5. McClelland, V. et al. Vici syndrome associated with sensorineural hearing loss and evidence of neuromuscular involvement on muscle biopsy. Am. J. Med. Genet. A. 152A, 741–747 (2010).
    Article PubMed Google Scholar
  6. Al-Owain, M. et al. Vici syndrome associated with unilateral lung hypoplasia and myopathy. Am. J. Med. Genet. A. 152A, 1849–1853 (2010).
    Article PubMed Google Scholar
  7. Said, E., Soler, D. & Sewry, C. Vici syndrome—a rapidly progressive neurodegenerative disorder with hypopigmentation, immunodeficiency and myopathic changes on muscle biopsy. Am. J. Med. Genet. A. 158A, 440–444 (2012).
    Article PubMed Google Scholar
  8. Finocchi, A. et al. Immunodeficiency in Vici syndrome: a heterogeneous phenotype. Am. J. Med. Genet. A. 158A, 434–439 (2012).
    Article PubMed Google Scholar
  9. Rogers, C.R., Aufmuth, B. & Monesson, S. Vici Syndrome: a rare autosomal recessive syndrome with brain anomalies, cardiomyopathy, and severe intellectual disability. In Case Reports in Genetics Vol. 2011 1–4 (Hindawi Publishing Corporation, Cairo, NY, 2011).
  10. Tian, Y. et al. C. elegans screen identifies autophagy genes specific to multicellular organisms. Cell 141, 1042–1055 (2010).
    Article CAS PubMed Google Scholar
  11. Halama, N., Grauling-Halama, S.A., Beder, A. & Jager, D. Comparative integromics on the breast cancer–associated gene KIAA1632: clues to a cancer antigen domain. Int. J. Oncol. 31, 205–210 (2007).
    CAS PubMed Google Scholar
  12. Sjöblom, T. et al. The consensus coding sequences of human breast and colorectal cancers. Science 314, 268–274 (2006).
    Article PubMed Google Scholar
  13. Levine, B. & Kroemer, G. Autophagy in the pathogenesis of disease. Cell 132, 27–42 (2008).
    Article CAS PubMed PubMed Central Google Scholar
  14. Klionsky, D.J. Autophagy: from phenomenology to molecular understanding in less than a decade. Nat. Rev. Mol. Cell Biol. 8, 931–937 (2007).
    Article CAS PubMed Google Scholar
  15. Mizushima, N. Autophagy: process and function. Genes Dev. 21, 2861–2873 (2007).
    Article CAS PubMed Google Scholar
  16. Maiuri, M.C., Zalckvar, E., Kimchi, A. & Kroemer, G. Self-eating and self-killing: crosstalk between autophagy and apoptosis. Nat. Rev. Mol. Cell Biol. 8, 741–752 (2007).
    Article CAS PubMed Google Scholar
  17. Rubinsztein, D.C., Gestwicki, J.E., Murphy, L.O. & Klionsky, D.J. Potential therapeutic applications of autophagy. Nat. Rev. Drug Discov. 6, 304–312 (2007).
    Article CAS PubMed Google Scholar
  18. Klionsky, D.J. et al. A comprehensive glossary of autophagy-related molecules and processes. Autophagy 7, 1273–1294 (2010).
    Article Google Scholar
  19. Mizushima, N. & Klionsky, D.J. Protein turnover via autophagy: implications for metabolism. Annu. Rev. Nutr. 27, 19–40 (2007).
    Article CAS PubMed Google Scholar
  20. Di Bartolomeo, S., Nazio, F. & Cecconi, F. The role of autophagy during development in higher eukaryotes. Traffic 11, 1280–1289 (2010).
    Article CAS PubMed Google Scholar
  21. Tra, T. et al. Autophagy in human embryonic stem cells. PLoS ONE 6, e27485 (2011).
    Article CAS PubMed PubMed Central Google Scholar
  22. Sandri, M. Autophagy in skeletal muscle. FEBS Lett. 584, 1411–1416 (2010).
    Article CAS PubMed Google Scholar
  23. Portbury, A.L., Willis, M.S. & Patterson, C. Tearin' up my heart: proteolysis in the cardiac sarcomere. J. Biol. Chem. 286, 9929–9934 (2011).
    Article CAS PubMed PubMed Central Google Scholar
  24. Cao, D.J., Gillette, T.G. & Hill, J.A. Cardiomyocyte autophagy: remodeling, repairing, and reconstructing the heart. Curr. Hypertens. Rep. 11, 406–411 (2009).
    Article PubMed PubMed Central Google Scholar
  25. Li, W. et al. Autophagy genes function sequentially to promote apoptotic cell corpse degradation in the engulfing cell. J. Cell Biol. 197, 27–35 (2012).
    Article CAS PubMed PubMed Central Google Scholar
  26. Lange, S. et al. The kinase domain of titin controls muscle gene expression and protein turnover. Science 308, 1599–1603 (2005).
    Article CAS PubMed Google Scholar
  27. Waters, S., Marchbank, K., Solomon, E., Whitehouse, C. & Gautel, M. Interactions with LC3 and polyubiquitin chains link nbr1 to autophagic protein turnover. FEBS Lett. 583, 1846–1852 (2009).
    Article CAS PubMed Google Scholar
  28. Kirkin, V., Lamark, T., Johansen, T. & Dikic, I. NBR1 cooperates with p62 in selective autophagy of ubiquitinated targets. Autophagy 5, 732–733 (2009).
    Article CAS PubMed Google Scholar
  29. Perera, S., Holt, M.R., Mankoo, B.S. & Gautel, M. Developmental regulation of MURF ubiquitin ligases and autophagy proteins nbr1, p62/SQSTM1 and LC3 during cardiac myofibril assembly and turnover. Dev. Biol. 351, 46–61 (2011).
    Article CAS PubMed PubMed Central Google Scholar
  30. Selcen, D. et al. Mutation in BAG3 causes severe dominant childhood muscular dystrophy. Ann. Neurol. 65, 83–89 (2009).
    Article CAS PubMed PubMed Central Google Scholar
  31. Edström, L., Thornell, L.E., Albo, J., Landin, S. & Samuelsson, M. Myopathy with respiratory failure and typical myofibrillar lesions. J. Neurol. Sci. 96, 211–228 (1990).
    Article PubMed Google Scholar
  32. Masiero, E. & Sandri, M. Autophagy inhibition induces atrophy and myopathy in adult skeletal muscles. Autophagy 6, 307–309 (2010).
    Article CAS PubMed Google Scholar
  33. Taneike, M. et al. Inhibition of autophagy in the heart induces age-related cardiomyopathy. Autophagy 6, 600–606 (2010).
    Article CAS PubMed Google Scholar
  34. Klionsky, D.J. et al. Guidelines for the use and interpretation of assays for monitoring autophagy. Autophagy 8, 445–544 (2012).
    Article CAS PubMed PubMed Central Google Scholar
  35. Schiaffino, S. & Mammucari, C. Regulation of skeletal muscle growth by the IGF1-Akt/PKB pathway: insights from genetic models. Skelet. Muscle 1, 4 (2011).
    Article CAS PubMed PubMed Central Google Scholar
  36. Zhang, Y. et al. The role of autophagy in mitochondria maintenance: characterization of mitochondrial functions in autophagy-deficient S. cerevisiae strains. Autophagy 3, 337–346 (2007).
    Article CAS PubMed Google Scholar
  37. Nishino, I. et al. Primary LAMP-2 deficiency causes X-linked vacuolar cardiomyopathy and myopathy (Danon disease). Nature 406, 906–910 (2000).
    Article CAS PubMed Google Scholar
  38. Fukuda, T. et al. Autophagy and mistargeting of therapeutic enzyme in skeletal muscle in Pompe disease. Mol. Ther. 14, 831–839 (2006).
    Article CAS PubMed Google Scholar
  39. Lünemann, J.D. et al. β-amyloid is a substrate of autophagy in sporadic inclusion body myositis. Ann. Neurol. 61, 476–483 (2007).
    Article PubMed Google Scholar
  40. Fujita, E. et al. Two endoplasmic reticulum–associated degradation (ERAD) systems for the novel variant of the mutant dysferlin: ubiquitin/proteasome ERAD(I) and autophagy/lysosome ERAD(II). Hum. Mol. Genet. 16, 618–629 (2007).
    Article CAS PubMed Google Scholar
  41. Terman, A. & Brunk, U.T. Autophagy in cardiac myocyte homeostasis, aging, and pathology. Cardiovasc. Res. 68, 355–365 (2005).
    Article CAS PubMed Google Scholar
  42. Nakai, A. et al. The role of autophagy in cardiomyocytes in the basal state and in response to hemodynamic stress. Nat. Med. 13, 619–624 (2007).
    Article CAS PubMed Google Scholar
  43. Nishida, K., Kyoi, S., Yamaguchi, O., Sadoshima, J. & Otsu, K. The role of autophagy in the heart. Cell Death Differ. 16, 31–38 (2009).
    Article CAS PubMed Google Scholar
  44. Williams, A. et al. Aggregate-prone proteins are cleared from the cytosol by autophagy: therapeutic implications. Curr. Top. Dev. Biol. 76, 89–101 (2006).
    Article CAS PubMed Google Scholar
  45. Fimia, G.M. et al. Ambra1 regulates autophagy and development of the nervous system. Nature 447, 1121–1125 (2007).
    Article CAS PubMed Google Scholar
  46. Schmid, D. & Munz, C. Innate and adaptive immunity through autophagy. Immunity 27, 11–21 (2007).
    Article CAS PubMed PubMed Central Google Scholar
  47. Pua, H.H., Dzhagalov, I., Chuck, M., Mizushima, N. & He, Y.W. A critical role for the autophagy gene Atg5 in T cell survival and proliferation. J. Exp. Med. 204, 25–31 (2007).
    Article CAS PubMed PubMed Central Google Scholar
  48. Ganesan, A.K. et al. Genome-wide siRNA-based functional genomics of pigmentation identifies novel genes and pathways that impact melanogenesis in human cells. PLoS Genet. 4, e1000298 (2008).
    Article PubMed PubMed Central Google Scholar
  49. Li, H. et al. The Sequence Alignment/Map format and SAMtools. Bioinformatics 25, 2078–2079 (2009).
    PubMed PubMed Central Google Scholar
  50. Li, K. & Stockwell, T.B. VariantClassifier: a hierarchical variant classifier for annotated genomes. BMC Res. Notes 3, 191 (2010).
    Article PubMed PubMed Central Google Scholar
  51. Heath, K.E., Day, I.N. & Humphries, S.E. Universal primer quantitative fluorescent multiplex (UPQFM) PCR: a method to detect major and minor rearrangements of the low density lipoprotein receptor gene. J. Med. Genet. 37, 272–280 (2000).
    Article CAS PubMed PubMed Central Google Scholar
  52. Obermann, W.M. et al. The structure of the sarcomeric M band: localization of defined domains of myomesin, M-protein, and the 250-kD carboxy-terminal region of titin by immunoelectron microscopy. J. Cell Biol. 134, 1441–1453 (1996).
    Article CAS PubMed Google Scholar
  53. Harlow, E. & Lane, D. Antibodies, a Laboratory Manual (Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 1988).

Download references

Acknowledgements

We are grateful to the individuals with Vici syndrome and their families for their participation in this study. We would like to thank our colleagues at the Genomics Facility of the Comprehensive Biomedical Research Centre of Guy's and St Thomas' NHS Foundation Trust for their support. We would also like to thank the physicians D. Creel, R.O. Hoffman and L. Al-Gazali for their input and productive discussions. H.J. was supported by a grant from the Guy's and St Thomas' Charitable Foundation (grant 070404). M.G. and A.L.K. were supported by the Leducq Foundation Transatlantic Network Proteotoxicity (11 CVD 04) and the Medical Research Council of Great Britain (MR/J010456/1). M.G. holds the British Heart Foundation Chair of Molecular Cardiology. H.J. would like to dedicate this work to the memory of Rahul Ghosh, his first patient with Vici syndrome.

Author information

Author notes

  1. Thomas Cullup and Ay Lin Kho: These authors contributed equally to this work.
  2. Mathias Gautel and Heinz Jungbluth: These authors jointly directed this work.

Authors and Affiliations

  1. DNA Laboratory, Guy's and St Thomas' Serco Pathology, Guy's Hospital, London, UK
    Thomas Cullup, Frances Smith, Shu Yau & Stephen Abbs
  2. Randall Division of Cell and Molecular Biophysics, King's College London, London, UK
    Ay Lin Kho, Birgit Brandmeier & Mathias Gautel
  3. Cardiovascular Division, King's College London British Heart Foundation Centre of Research Excellence, London, UK
    Ay Lin Kho, Birgit Brandmeier & Mathias Gautel
  4. Division of Metabolism, Bambino Gesù Children's Hospital, Istituto di Ricovero e Cure a Carattere Scientifico, Rome, Italy
    Carlo Dionisi-Vici
  5. Laboratory of Molecular Medicine, Bambino Gesù Children's Hospital, Istituto di Ricovero e Cure a Carattere Scientifico, Rome, Italy
    Carlo Dionisi-Vici & Enrico Bertini
  6. Division of Genetics and Molecular Medicine, King's College London School of Medicine, Guy's Hospital, London, UK
    Zoe Urry & Michael A Simpson
  7. Department of Paediatric Neurology, Evelina Children's Hospital, Guy's and St Thomas' National Health Service (NHS) Foundation Trust, London, UK
    Verity McClelland & Heinz Jungbluth
  8. Department of Medical Genetics, King Faisal Specialist Hospital and Research Centre, Riyadh, Saudi Arabia
    Mohammed Al-Owain
  9. Faculty of Medicine, Alfaisal University, Riyadh, Saudi Arabia
    Mohammed Al-Owain
  10. Division of Inherited Metabolic Diseases, University Children's Hospital, Heidelberg, Germany
    Stefan Koelker, Christian Koerner & Georg F Hoffmann
  11. Department of Pediatrics, Academic Medical Centre, University of Amsterdam, Amsterdam, The Netherlands
    Frits A Wijburg & Amber E ten Hoedt
  12. Greenwood Genetic Center, Greenville, South Carolina, USA
    R Curtis Rogers
  13. Department of Pediatrics, Clinical Genetics and Metabolism, University of Colorado School of Medicine, Children's Hospital Colorado, Aurora, Colorado, USA
    David Manchester
  14. Department of Pediatrics, Tokyo Kita Shakai Hoken Hospital, Tokyo, Japan
    Rie Miyata
  15. Department of Brain Development and Neural Regeneration, Tokyo Metropolitan Institute of Medical Science, Tokyo, Japan
    Masaharu Hayashi
  16. Section of Medical Genetics, Mater dei Hospital, Msida, Malta
    Elizabeth Said
  17. Department of Anatomy & Cell Biology, University of Malta, Msida, Malta
    Elizabeth Said
  18. Department of Paediatrics, Mater dei Hospital, Msida, Malta
    Doriette Soler
  19. Institute of Human Genetics, Medical University of Graz, Graz, Austria
    Peter M Kroisel & Christian Windpassinger
  20. Division of Pediatric Neurology, University of Utah School of Medicine, Salt Lake City, Utah, USA
    Francis M Filloux
  21. Department of Pediatrics, Tawam Hospital, Al-Ain, UAE
    Salwa Al-Kaabi & Jozef Hertecant
  22. Genetics Department, Hospital Vall d'Hebron, Barcelona, Spain
    Miguel Del Campo
  23. Department of Clinical Neuropathology, Academic Neuroscience Centre, King's College Hospital, London, UK
    Stefan Buk & Istvan Bodi
  24. Department of Neuropathology, Johannes Gutenberg University Medical Centre, Mainz, Germany
    Hans-Hilmar Goebel
  25. Dubowitz Neuromuscular Centre, Institute of Child Health, University College London, London, UK
    Caroline A Sewry
  26. Department of Clinical Genetics, Guy's Hospital, London, UK
    Shehla Mohammed & Dragana Josifova
  27. Clinical Neuroscience Division, Institute of Psychiatry, King's College London, London, UK
    Heinz Jungbluth

Authors

  1. Thomas Cullup
    You can also search for this author inPubMed Google Scholar
  2. Ay Lin Kho
    You can also search for this author inPubMed Google Scholar
  3. Carlo Dionisi-Vici
    You can also search for this author inPubMed Google Scholar
  4. Birgit Brandmeier
    You can also search for this author inPubMed Google Scholar
  5. Frances Smith
    You can also search for this author inPubMed Google Scholar
  6. Zoe Urry
    You can also search for this author inPubMed Google Scholar
  7. Michael A Simpson
    You can also search for this author inPubMed Google Scholar
  8. Shu Yau
    You can also search for this author inPubMed Google Scholar
  9. Enrico Bertini
    You can also search for this author inPubMed Google Scholar
  10. Verity McClelland
    You can also search for this author inPubMed Google Scholar
  11. Mohammed Al-Owain
    You can also search for this author inPubMed Google Scholar
  12. Stefan Koelker
    You can also search for this author inPubMed Google Scholar
  13. Christian Koerner
    You can also search for this author inPubMed Google Scholar
  14. Georg F Hoffmann
    You can also search for this author inPubMed Google Scholar
  15. Frits A Wijburg
    You can also search for this author inPubMed Google Scholar
  16. Amber E ten Hoedt
    You can also search for this author inPubMed Google Scholar
  17. R Curtis Rogers
    You can also search for this author inPubMed Google Scholar
  18. David Manchester
    You can also search for this author inPubMed Google Scholar
  19. Rie Miyata
    You can also search for this author inPubMed Google Scholar
  20. Masaharu Hayashi
    You can also search for this author inPubMed Google Scholar
  21. Elizabeth Said
    You can also search for this author inPubMed Google Scholar
  22. Doriette Soler
    You can also search for this author inPubMed Google Scholar
  23. Peter M Kroisel
    You can also search for this author inPubMed Google Scholar
  24. Christian Windpassinger
    You can also search for this author inPubMed Google Scholar
  25. Francis M Filloux
    You can also search for this author inPubMed Google Scholar
  26. Salwa Al-Kaabi
    You can also search for this author inPubMed Google Scholar
  27. Jozef Hertecant
    You can also search for this author inPubMed Google Scholar
  28. Miguel Del Campo
    You can also search for this author inPubMed Google Scholar
  29. Stefan Buk
    You can also search for this author inPubMed Google Scholar
  30. Istvan Bodi
    You can also search for this author inPubMed Google Scholar
  31. Hans-Hilmar Goebel
    You can also search for this author inPubMed Google Scholar
  32. Caroline A Sewry
    You can also search for this author inPubMed Google Scholar
  33. Stephen Abbs
    You can also search for this author inPubMed Google Scholar
  34. Shehla Mohammed
    You can also search for this author inPubMed Google Scholar
  35. Dragana Josifova
    You can also search for this author inPubMed Google Scholar
  36. Mathias Gautel
    You can also search for this author inPubMed Google Scholar
  37. Heinz Jungbluth
    You can also search for this author inPubMed Google Scholar

Contributions

T.C. designed the experiments, performed whole-exome capture, Sanger sequencing, cDNA sequencing and quantitative PCR (qPCR) analysis, analyzed data and wrote the manuscript. A.L.K. and B.B. performed immunostaining, confocal microscopy, cell culture studies and protein blotting. Z.U. performed qPCR analysis. F.S., M.A.S., S.Y. and S.A. prepared and performed whole-exome capture and analyzed the exome sequencing data. C.D.-V., E.B., V.M., M.A.-O., S.K., C.K., G.F.H., F.A.W., A.E.t.H., R.C.R., D.M., R.M., M.H., E.S., D.S., P.M.K., C.W., F.M.F., S.A.-K., J.H. and M.D.C. provided clinical data. S.B., I.B., H.-H.G. and C.A.S. provided and analyzed neuropathological data. S.M. and D.J. provided clinical data and oversaw genetic aspects of the research. M.G. analyzed data obtained from immunostaining, confocal microscopy, cell culture studies and protein blotting and wrote the manuscript. H.J. provided clinical and neuropathological data, analyzed exome and Sanger sequencing data, oversaw all aspects of the research and wrote the manuscript.

Corresponding authors

Correspondence toMathias Gautel or Heinz Jungbluth.

Ethics declarations

Competing interests

The authors declare no competing financial interests.

Supplementary information

Rights and permissions

About this article

Cite this article

Cullup, T., Kho, A., Dionisi-Vici, C. et al. Recessive mutations in EPG5 cause Vici syndrome, a multisystem disorder with defective autophagy.Nat Genet 45, 83–87 (2013). https://doi.org/10.1038/ng.2497

Download citation