Distribution of histone deacetylases 1–11 in the rat brain (original) (raw)
Acharya M. R., Sparreboom, A., Venitz J., and Figg W. D. (2005) Rational development of histone deacetylase inhibitors as anticancer agents: a review. Mol. Pharmacol.68, 917–932. ArticlePubMedCAS Google Scholar
Ajamian F., Suuronen T., Salminen A., and Reeben M. (2003) Upregulation of class II histone deacetylases mRNA during neural differentiation of cultured rat hippocampal progenitor cells. neurosci. Lett.346, 57–60. ArticlePubMedCAS Google Scholar
Alarcon J. M., Malleret G., Touzani K., et al. (2004) Chromatin acetylation memory, and LTP are impaired in CBP+/−mice: a model for the cognitive deficit in Rubinstein-Taybi syndrome and its amelioration. Neuron42, 947–959. ArticlePubMedCAS Google Scholar
Araki T., Sasaki Y., and Milbrandt J. (2004) Increased nuclear NAD biosynthesis and SIRT1 activation prevent axonal degeneration. Science305, 1010–1013. ArticlePubMedCAS Google Scholar
Bereshchenko O. R., Gu W., and Dalla-Favera R. (2002) Acetylation inactivates the transcriptional repressor BCL6. Nat. Genet.32, 606–613. ArticlePubMedCAS Google Scholar
Bolger T. A. and Yao T. P. (2005) Intracellular trafficking of histone deacetylase 4 regulates neuronal cell death. J. Neurosci.25, 9544–9553. ArticlePubMedCAS Google Scholar
Bradbury C. A., Khanim G. L., Hayden R., et al. (2005). Histone deacetylase in acute myeloid leukaemia show a distinctive pattern of expression that changes selectively in response to deacetylase inhibitors. Leukemia19, 1751–1759. ArticlePubMedCAS Google Scholar
Broide R. S., Trembleau A., Ellison J. A., et al. (2004) Standardized quantitative in situ hybridization using radioactive oligonucleotide probes for detecting relative levels of mRNA transcripts verified by real-time PCR. Brain Res.1000 211–222. ArticlePubMedCAS Google Scholar
Camelo S., Iglesias A. H., Hwang D., et al. (2005) Transcriptional therapy with the histone deacetylase inhibitor trichostatin A ameliorates experimental autoimmune encephalomyelitis. J Neuroimmunol.164, 10–21. ArticlePubMedCAS Google Scholar
Chiurazzi P., Pomponi M. G., Pietrobono R., Bakker C. E., Neri G., and Oostra B. A. (1999) Synergistic effect of histone hyperacetylation and DNA demethylation in the reactivation of the FMR1 gene. Hum. Mol. Genet.8, 2317–2323. ArticlePubMedCAS Google Scholar
Choi J. H., Oh S. W., Kang M. S., et al. (2001) Expression profile of histone deacetylase 1 in gastric cancer tissues. Jpn. J. Cancer Res.92, 1300–1304. PubMedCAS Google Scholar
Choi J. H., Kwon H. J., Yoon B. I., et al. (2005) Trichostatin A attenuates airway inflammation in mouse asthma model. Clin. Exp. Allergy35, 89–96. ArticlePubMedCAS Google Scholar
Dokmanovic M. and Marks P. A. (2005) Prospects: histone deacetylase inhibitors. J. Cell. Biochem.96, 293–304. ArticlePubMedCAS Google Scholar
Emerich D. F., Skinner S. J., Borlongan C. V., Vasconcellos A. V., and Thanos C. G. (2005) The choroid plexus in the rise, fall and repair of the brain. Bioessays27, 262–274. ArticlePubMedCAS Google Scholar
Ferrante R. J., Kublius J. K., Lee J., et al. (2003) Histone deacetylase inhibition by sodium butyrate chemotherapy ameliorates the neurodegenerative phenotype in Huntington's disease mice. J. Neurosci.23, 9418–9427. PubMedCAS Google Scholar
Franklin K. B. J. and Paxinos G. (1997) The Mouse Brain in Stereotaxic Coordinates, Academic Press, San Diego, CA. Google Scholar
Gao L., Cueto M. A., Asselbergs F., and Atadja P. (2002) Cloning and functional characterization of HDAC11, a novel member of the human histone deacetylase family. J. Biol. Chem.277, 24,748–25,755. Google Scholar
Gardian G., Yang L., Cleren C., Calingasan N. Y., Klivenyi P., and Beal M. F. (2005) Neuroprotective effects of phenylbutyrate in the N171-82O transgenic mouse model of Huntington's disease. J. Biol. Chem.280, 556–563. PubMedCAS Google Scholar
Gardian G., Browne S. E., Choi D. K., et al. (2004) Neuroprotective effects of phenylbutyrate against MPTP neurotoxicity. Neuromol. Med.5, 235–241. ArticleCAS Google Scholar
Gregoretti I. V., Lee Y. M., and Goodson H. V. (2004) Molecular evolution of the histone deacetylase family: functional implications of phylogenetic analysis. J. Mol. Biol.338, 17–31. ArticlePubMedCAS Google Scholar
Haggarty S. J., Koeller K. M., Wong J. C., Grozinger C. M., and Schreiber, S. L. (2003) Domain-selective small-molecule inhibitor of histone deacetylase 6 (HDAC6)-mediated tubulin deacetylation. Proc. Natl. Acad. Sci. U. S. A.100, 4389–4394. ArticlePubMedCAS Google Scholar
Hao Y., Creson T., Zhang L., et al. (2004) Mood stabilizer valproate promotes ERK pathway-dependent cortical neuronal growth and neurogenesis. J. Neurosci.24, 6590–6599. ArticlePubMedCAS Google Scholar
Hockly E., Richon V. M., Woodman B., et al. (2003) Suberoylanilide hydroxamic acid, a histone deacetylase inhibitor, ameliorates motor deficits in a mouse model of Huntington's disease. Proc. Natl. Acad. Sci. U.S.A.100, 2041–2046. ArticlePubMedCAS Google Scholar
Hoshino M., Tagawa K., Okuda T., et al. (2003) Histone deacetylase activity is retained in primary neurons expressing mutant huntingtin protein. J. Neurochem., 87, 257–267. ArticlePubMedCAS Google Scholar
Ito, K., Caramori G., Lim S., et al. (2002) Expression and activity of histone deacetylases in human asthmatic airways. Am. J. Respir. Crit. Care Med.166, 392–396. ArticlePubMed Google Scholar
Ito K. K., Ito M., Elliott W. M., et al. (2005) Decreased histone deacetylase activity in chronic obstructive pulmonary disease. N. Engl. J. Med.352, 1967–1976. ArticlePubMedCAS Google Scholar
Jeong M. R., Hashimoto, R., Senatorov V. V., et al. (2003) Valproic acid, a mood stabilizer and anticonvulsant, protects rat cerebral cortical neurons from spontaneous cell death: a role of histone deacetylase inhibition. FEBS Lett.542, 74–78. ArticlePubMedCAS Google Scholar
Johnstone R. W. (2002) Histone-deacetylase inhibitors: novel drugs for the treatment of cancer. Nat. Rev. Drug Discov.1, 287–299. ArticlePubMedCAS Google Scholar
Kawaguchi Y., Kovacs J. J., McLaruin A., Vance J. M., Ito, A., and Yao T. P. (2003) The deacetylase HDAC6 regulates aggresome formation and cell viability in response to misfolded protein stress. Cell115, 727–738. ArticlePubMedCAS Google Scholar
Kelly W. K., O'Connor O. A., Krug L. M., et al. (2005) Phase I study of an oral histone deacetylase inhibitor, suberoylanilide hydroxamic acid, in patients with advanced cancer. J. Clin. Oncol.23, 3923–3931. ArticlePubMedCAS Google Scholar
Kouraklis G. and Theocharis S. (2002) Histone deacetylase inhibitors and anticancer therapy. Curr. Med. Chem. Anti-Cancer Agents2, 477–484. ArticleCAS Google Scholar
Langley B., Gensert J. M., Beal M. F., and Ratan R. R. (2005) Remodeling chromatin and stress resistance in the central nervous system: histone deacetylase inhibitors as noveland broadly effective neuroprotective agents. Curr. Drug Targets CNS Neurol. Disord.4, 41–50. ArticlePubMedCAS Google Scholar
Lin A. Y. (2005) Histone deacetylase activity and COPD, author reply. N. Engl. J. Med.353, 528, 529. ArticlePubMedCAS Google Scholar
Marks P. A., Miller T., and Richon V. M. (2003) Histone deacetylases. Curr. Opin. Pharmacol.3, 344–351. ArticlePubMedCAS Google Scholar
Marks P. A., Richon V. M., Miller T., and Kelley W. K. (2004) Histone deacetylase inhibitors. Adv. Cancer Res.91, 137–168. ArticlePubMedCAS Google Scholar
Moradei O., Maroun C. R., Paquin I., and Vaisburg A. (2005) Histone deacetylase inhibitors: latest developments, trends and prospects. Curr. Med. Chem. Anti-Cancer Agents5, 529–560. ArticleCAS Google Scholar
Naruse Y., Oh-hashi K., Iijima N., Naruse M., Yoshioka H., and Tanaka M. (2004) Circadian and light-induced transcription of clock gene Per1 depends on histone acetylation and deacetylation. Mol. Cell. Biol.24, 6278–6287. ArticlePubMedCAS Google Scholar
Panteleeva I., Rouaux C., Larmet Y., Boutillier S., Loeffler J. P., and Boutillier A. L. (2004) HDAC-3 participates in the repression of e2f-dependent gene transcription in primary differentiated neurons. Ann. N. Y. Acad. Sci.1030, 656–660. ArticlePubMedCAS Google Scholar
Ren M., Leng Y., Jeong M., Leeds P. R., and Chuang D. M. (2004) Valproic acid reduces brain damage induced by transient focal cerebral ischemia in rats: potential roles of histone deacetylase inhibition and heat shock protein induction. J. Neurochem.89, 1358–1367. ArticlePubMedCAS Google Scholar
Richon V. M., Zhou X., Rifkind R. A., and Marks P. A. (2001) Histone deacetylase inhibitors: development of suberoylanilide hydroxamic acid (SAHA) for the treatment of cancers. Blood Cell Mol. Dis.27, 260–264. ArticleCAS Google Scholar
Robyr D., Suka Y., Xenarios I., et al. (2002) Microarray deacetylation maps determine genome-wide functions for yeast histone deacetylases Cell109, 437–446. ArticlePubMedCAS Google Scholar
Roth S.Y., Denu J. M., and Allis C. D. (2001) Histone acetyltransferases. Annu. Rev. Biochem.70, 81–120. ArticlePubMedCAS Google Scholar
Saha R. N. and Pahan K. (2005) HATs and HDACs in neurodegeneration: a tale of disconcerted acetylation homeostasis. Cell Death Differ39, 539–550. Google Scholar
Shabbeer S., and Carducci M. A. (2005) Focus on deacetylation for therapeutic benefit. Investigational Drugs8, 144–154. CAS Google Scholar
Shen S., Li J., and Casaccia-Bonnefil P. (2005) Histone modifications affect timing of oligodendrocyte progenitor differentiation in the developing rat brain. J. Cell. Biol.169, 577–589. ArticlePubMedCAS Google Scholar
Vaghefi H., and Neet K. E. (2004) Deacetylation of p53 after nerve growth factor treatment in PC12 cells as a post-translational modification mechanism of neurotrophin-induced tumor suppressor activation. Oncogene23, 8078–8087. ArticlePubMedCAS Google Scholar
Voelter-Mahlknecht S., Ho A. D., and Mahlknecht, U. (2005) Chromosomal organization and locolization of the novel class IV human histone deacetylase 11 gene. Int. J. Mol. Med.16, 589–598. PubMedCAS Google Scholar
Yamaguchi M., Tonou-Fujimori N., Komori A., et al. (2005) Histone deacetylase 1 regulates retinal neurogenesis in zebrafish by suppressing Wnt and Notch signaling pathways. Development132, 3027–3043. ArticlePubMedCAS Google Scholar
Yu X., Guo Z. S., Marcu M. G., et al. (2002) Modulation of p53, ErbB1, ErbB2, and Raf-1 expression in lung cancer cells by depsipeptide FR901228. J. Natl. Cancer Inst.94, 504–513. PubMedCAS Google Scholar