Protein design by optimization of a sequence-structure quality function (original) (raw)
Related papers
A quantitative methodology for the de novo design of proteins
Protein Science, 1994
Automated Protein Design and Sequence Optimisation Scoring Functions and the Search Problem
Current Protein & Peptide Science, 2000
Automatic Procedures for Protein Design
Combinatorial Chemistry & High Throughput Screening, 2001
Theoretical and Computational Protein Design
Annual Review of Physical Chemistry, 2011
Advances In Computational Protein Design
Current Opinion in Structural Biology, 2004
Native protein sequences are close to optimal for their structures.
Computational protein design as an optimization problem
Artificial Intelligence, 2014
Journal of Molecular Biology, 2000
The Framework of Computational Protein Design
Computational protein design: structure, function and combinatorial diversity
Current Opinion in Chemical Biology, 2007
A novel iterative strategy for protein design
Chemical Physics, 2000
Evaluating the accuracy of protein design using native secondary sub-structures
BMC Bioinformatics, 2016
Using genetic algorithm to design protein sequence
Applied Mathematics and Computation, 2008
Prediction of amino acid sequence from structure
Protein Science, 2000
Methods in Molecular Biology, 2017
Review: Protein Design—Where We Were, Where We Are, Where We're Going
Journal of Structural Biology, 2001
Structure‐based design of model proteins
Proteins: Structure, Function, and Genetics, 1998
Computational approaches toward Protein Design
2016
Zdzisław Wiśniowski, Monika Piwowar
Medical science monitor : international medical journal of experimental and clinical research, 2006
An improved protein structure evaluation using a semi-empirically derived structure property
BMC Structural Biology
Improving computational protein design by using structure‐derived sequence profile
2010
Computational protein design promises to revolutionize protein engineering
Biotechniques, 2007
Recent advances in automated protein design and its future challenges
Expert opinion on drug discovery, 2018
Fast gap-free enumeration of conformations and sequences for protein design
Proteins, 2015
Achievements and Challenges in Computational Protein Design
Computationally Assisted Protein Design
Annual Reports in Computational Chemistry, 2005
Protein sequence design by conformational landscape optimization
Proceedings of the National Academy of Sciences, 2021
Advances in protein structure prediction and de novo protein design: A review
2006
Journal of Molecular Biology, 2003
Protein engineering structure and design, prediction and evolution: cycling to success
Current Opinion in Biotechnology, 1998
A Deterministic Optimization Approach to Protein Sequence Design Using Continuous Models
The International Journal of Robotics Research, 2005