protein-coding gene in the species Homo sapiens
- VSGP/F-spondin
- f-spondin
- Spondin 1
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| Language |
Label |
Description |
Also known as |
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No label defined |
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| English |
SPON1 |
protein-coding gene in the species Homo sapiens |
VSGP/F-spondinf-spondinSpondin 1 |
Statements
instance of
gene
1 reference
stated in
ensembl Release 106
Ensembl gene ID
ENSG00000262655
subclass of
protein-coding gene
1 reference
stated in
NCBI homo sapiens annotation release 107
Entrez Gene ID
10418
retrieved
15 December 2016
image
Protein SPON1 PDB 1szl.png
719 × 243; 67 KB
0 references
found in taxon
Homo sapiens
1 reference
stated in
ensembl Release 106
Ensembl gene ID
ENSG00000262655
encodes
Spondin 1
1 reference
stated in
UniProt
retrieved
6 July 2017
UniProt protein ID
Q9HCB6
genetic association
tuberculosis
determination method or standard
genome-wide association study
TAS
1 reference
reference URL
https://gemma.msl.ubc.ca/phenotypes.html?phenotypeUrlId=DOID_399&ncbiId=10418
http://www.genome.gov/gwastudies/index.cfm?gene=SPON1
stated in
Phenocarta
Genome-wide association study of ancestry-specific TB risk in the South African Coloured population
retrieved
25 May 2020
chromosome
human chromosome 11
genomic assembly
genome assembly GRCh38
Genome assembly GRCh37
1 reference
stated in
ensembl Release 106
Ensembl gene ID
ENSG00000262655
strand orientation
forward strand
genomic assembly
genome assembly GRCh38
Genome assembly GRCh37
1 reference
stated in
ensembl Release 106
Ensembl gene ID
ENSG00000262655
genomic start
13983914
chromosome
human chromosome 11
genomic assembly
Genome assembly GRCh37
1 reference
stated in
ensembl Release 106
Ensembl gene ID
ENSG00000262655
13962723
chromosome
human chromosome 11
genomic assembly
genome assembly GRCh38
1 reference
stated in
ensembl Release 106
Ensembl gene ID
ENSG00000262655
genomic end
14289646
chromosome
human chromosome 11
genomic assembly
Genome assembly GRCh37
1 reference
stated in
ensembl Release 106
Ensembl gene ID
ENSG00000262655
14268133
chromosome
human chromosome 11
genomic assembly
genome assembly GRCh38
1 reference
stated in
ensembl Release 106
Ensembl gene ID
ENSG00000262655
cytogenetic location
11p15.2
1 reference
stated in
NCBI Gene
retrieved
15 May 2022
Entrez Gene ID
10418
HomoloGene ID
4453
1 reference
stated in
NCBI Gene
retrieved
15 May 2022
Entrez Gene ID
10418
Gene Atlas image
PBB GE SPON1 209436 at fs.png
732 × 530; 11 KB
0 references
PBB GE SPON1 209437 s at fs.png
732 × 530; 11 KB
0 references
PBB GE SPON1 213993 at fs.png
732 × 530; 12 KB
0 references
ortholog
Spon1
found in taxon
house mouse
2 references
stated in
HomoloGene build68
HomoloGene ID
4453
stated in
Orthologous MAtrix
reference URL
https://omabrowser.org/oma/vps/Q9HCB6/
Spon1
found in taxon
brown rat
2 references
stated in
HomoloGene build68
HomoloGene ID
4453
stated in
Orthologous MAtrix
reference URL
https://omabrowser.org/oma/vps/Q9HCB6/
CG17739
found in taxon
Drosophila melanogaster
2 references
stated in
HomoloGene build68
HomoloGene ID
4453
stated in
Orthologous MAtrix
reference URL
https://omabrowser.org/oma/vps/Q9HCB6/
spon1a
found in taxon
Danio rerio
2 references
stated in
HomoloGene build68
HomoloGene ID
4453
stated in
Orthologous MAtrix
reference URL
https://omabrowser.org/oma/vps/Q9HCB6/
expressed in
gallbladder
series ordinal
1
1 reference
stated in
Bgee
retrieved
7 June 2024
reference URL
https://www.bgee.org/gene/ENSG00000262655
mucosa of sigmoid colon
series ordinal
2
1 reference
stated in
Bgee
retrieved
7 June 2024
reference URL
https://www.bgee.org/gene/ENSG00000262655
pericardium
series ordinal
3
1 reference
stated in
Bgee
retrieved
7 June 2024
reference URL
https://www.bgee.org/gene/ENSG00000262655
lower lobe of lung
series ordinal
4
1 reference
stated in
Bgee
retrieved
7 June 2024
reference URL
https://www.bgee.org/gene/ENSG00000262655
cardia
series ordinal
5
1 reference
stated in
Bgee
retrieved
7 June 2024
reference URL
https://www.bgee.org/gene/ENSG00000262655
mucosa of urinary bladder
series ordinal
6
1 reference
stated in
Bgee
retrieved
7 June 2024
reference URL
https://www.bgee.org/gene/ENSG00000262655
external globus pallidus
series ordinal
7
1 reference
stated in
Bgee
retrieved
7 June 2024
reference URL
https://www.bgee.org/gene/ENSG00000262655
right lung
series ordinal
8
1 reference
stated in
Bgee
retrieved
7 June 2024
reference URL
https://www.bgee.org/gene/ENSG00000262655
visceral pleura
series ordinal
9
1 reference
stated in
Bgee
retrieved
7 June 2024
reference URL
https://www.bgee.org/gene/ENSG00000262655
parietal pleura
series ordinal
10
1 reference
stated in
Bgee
retrieved
7 June 2024
reference URL
https://www.bgee.org/gene/ENSG00000262655
exact match
http://identifiers.org/ncbigene/10418
1 reference
stated in
Identifiers.org
reference URL
http://www.ebi.ac.uk/miriam/main/collections/MIR:00000069
Identifiers
RefSeq RNA ID
NM_006108
1 reference
stated in
NCBI Gene
retrieved
15 May 2022
Entrez Gene ID
10418
Entrez Gene ID
10418
1 reference
stated in
NCBI Gene
retrieved
15 May 2022
Entrez Gene ID
10418
Ensembl gene ID
ENSG00000262655
1 reference
stated in
ensembl Release 106
Ensembl gene ID
ENSG00000262655
Ensembl transcript ID
ENST00000591785
1 reference
stated in
ensembl Release 106
Ensembl gene ID
ENSG00000262655
ENST00000576479
1 reference
stated in
ensembl Release 106
Ensembl gene ID
ENSG00000262655
Freebase ID
/m/03h02pk
0 references
HGNC gene symbol
SPON1
1 reference
stated in
NCBI Gene
retrieved
15 May 2022
Entrez Gene ID
10418
HGNC ID
11252
1 reference
stated in
NCBI Gene
retrieved
15 May 2022
Entrez Gene ID
10418
Microsoft Academic ID (discontinued)
2776120988
0 references
OMIM ID
604989
2 references
imported from Wikimedia project
Russian Wikipedia
stated in
Online Mendelian Inheritance in Man
retrieved
19 August 2019
UMLS CUI
C1420366
1 reference
based on heuristic
inferred by common HGNC mappings on source and on Wikidata
stated in
UMLS 2023
retrieved
15 June 2023
Sitelinks
Wikipedia(5 entries)
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Wikibooks(0 entries)
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Wikinews(0 entries)
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Wikiquote(0 entries)
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Wikisource(0 entries)
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Wikiversity(0 entries)
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Wikivoyage(0 entries)
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Wiktionary(0 entries)
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Multilingual sites(0 entries)
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