UpSetR: A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets (original) (raw)
Creates visualizations of intersecting sets using a novel matrix design, along with visualizations of several common set, element and attribute related tasks (Conway 2017) <doi:10.1093/bioinformatics/btx364>.
| Version: | 1.4.0 |
|---|---|
| Depends: | R (≥ 3.0) |
| Imports: | ggplot2, gridExtra, plyr, utils, stats, methods, grDevices, scales |
| Suggests: | knitr |
| Published: | 2019-05-22 |
| DOI: | 10.32614/CRAN.package.UpSetR |
| Author: | Jake Conway [cre], Nils Gehlenborg [aut] |
| Maintainer: | Jake Conway <jake_conway at hms.harvard.edu> |
| BugReports: | http://github.com/hms-dbmi/UpSetR/issues |
| License: | MIT + file |
| URL: | http://github.com/hms-dbmi/UpSetR |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | UpSetR results |
Documentation:
Downloads:
Reverse dependencies:
| Reverse imports: | artMS, ASpli, biblioverlap, bulkAnalyseR, dar, DiscoRhythm, fastml, iCOBRA, ideal, immunarch, ivygapSE, LymphoSeq, MAGAR, MatrixQCvis, MultiRNAflow, naniar, plinkQC, PolySTest, PRONE, PTXQC, RFLOMICS, rimu, seqsetvis, VennDetail, ViSEAGO |
|---|---|
| Reverse suggests: | Cepo, ChIPpeakAnno, distinct, DuplexDiscovereR, fuseMLR, GeneSelectR, ggpicrust2, HMP2Data, HoloFoodR, mastR, MetaNeighbor, miceFast, MultiAssayExperiment, MungeSumstats, muscat, OmicNavigator, pcutils, SingleCellMultiModal, smartid, spatialHeatmap, StabMap, systemPipeShiny, TFutils |
Linking:
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